Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  187 bits (474), Expect = 3e-52
 Identities = 114/287 (39%), Positives = 157/287 (54%), Gaps = 3/287 (1%)

Query: 6   PNLGALQAFEASARLGSFTRAAAELALTQSAVGRQVAMLEQRLGVPLFSRVRRRLTLTDV 65
           P++  L AFEA+AR  S+TRAAAEL+LTQSAV RQV  LEQ+LG+ LF R  R++ LTDV
Sbjct: 8   PSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQLTDV 67

Query: 66  GREYAARIRRHLDQIRRDTLEISAGHEMGFVLELAVVPTFATQWLIPRLPEFSELHPNIT 125
           GR Y   +   L +IR  TL+  A       L LA +PTF ++WL+PRL  F   HP + 
Sbjct: 68  GRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAHPGML 127

Query: 126 VNLSARSQPFSFQENAYDAAIYFGDQFWPNTRGGLIFAEGEMVPICSPAFRDANGPWDEA 185
           V++ +R +  +F  +  DAAI       P      + AE E+V I  P     +  W  A
Sbjct: 128 VHIHSRIETINFDTSEIDAAIGVASHDLPGLVCHRLHAE-ELVVILPPEAGVGSQGWSPA 186

Query: 186 GFERCRHVHLSTRAHAWRDWYAQQGWEYTVHASRGPRYELFTMVVAATAAGMGVGLAPRI 245
                  ++++   HAW +W++  G  +      GP +EL + ++ A  AG+G+GL PRI
Sbjct: 187 RISEEVLLNVANNPHAWGEWFSHHGLPHRA-MRLGPSFELTSHLIQAVRAGIGIGLVPRI 245

Query: 246 LVEHELKTGELVIPVDRHLDVRQGYYFAYPEGRPASGALEHFKRWVL 292
           LVE EL  GEL  P       R  YY  YP    A  +L  F+ W+L
Sbjct: 246 LVEEELAKGELYSPGVAFASQR-SYYLIYPPRNEALPSLRAFRGWLL 291