Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  234 bits (597), Expect = 2e-66
 Identities = 126/292 (43%), Positives = 171/292 (58%), Gaps = 3/292 (1%)

Query: 1   MRKDIPNLGALQAFEASARLGSFTRAAAELALTQSAVGRQVAMLEQRLGVPLFSRVRRRL 60
           MR+ IP+  AL  FEA+AR  SFT+AA ELALTQ AV RQ+  LE  L V LF R RR +
Sbjct: 1   MRRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGV 60

Query: 61  TLTDVGREYAARIRRHLDQIRRDTLEISAGHEMGFVLELAVVPTFATQWLIPRLPEFSEL 120
            LT+ G  Y+ ++   LD + RDTL +    +   V+ELAVVPTF TQWL+PRL +F + 
Sbjct: 61  RLTEAGLSYSRQVAAQLDAVERDTLSVMR-QQGANVIELAVVPTFGTQWLLPRLKDFQQR 119

Query: 121 HPNITVNLSARSQPFSFQENAYDAAIYFGDQFWPNTRGGLIFAEGEMVPICSPAFRDANG 180
           HP +TVNL+ R++PF F +  +DAAIYFGD  W  T+   +  E   VP+CSPA  +  G
Sbjct: 120 HPEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENP-VPVCSPALLNGQG 178

Query: 181 PWDEAGFERCRHVHLSTRAHAWRDWYAQQGWEYTVHASRGPRYELFTMVVAATAAGMGVG 240
             +     +   +  STR +AWR W+   G         GPRYELF+M+  A    MG+ 
Sbjct: 179 MLEARHIAQLPLLQQSTRPYAWRQWFGSVGMN-VERDMTGPRYELFSMLAQAAMHDMGIA 237

Query: 241 LAPRILVEHELKTGELVIPVDRHLDVRQGYYFAYPEGRPASGALEHFKRWVL 292
           L P  L++ EL+ G LV+     L   + YY   PE +  S +L  F+ W++
Sbjct: 238 LIPPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLV 289