Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 224 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 6e-30
 Identities = 77/224 (34%), Positives = 122/224 (54%), Gaps = 5/224 (2%)

Query: 4   VILLEDEAVLREELSEFLAGNGYRVDAEAS-LEGFRRSYDPARHGIALVDLGLPDGDGLV 62
           ++++EDE    + L + L  +GY VD  AS ++G   +   + + + ++D+ LP+ DG  
Sbjct: 3   ILVVEDEQKTADYLQQGLTESGYVVDCAASGIDGLHLARQHS-YELVILDVNLPNTDGWE 61

Query: 63  LIRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRRLGD 122
           ++ +LR  G +  +++LTARG   D++ GLD+GAD YL K  +  EL A +  L RR   
Sbjct: 62  VLEQLRRDGNQR-VMMLTARGRLADKIKGLDMGADDYLVKPFEFPELLARVRTLLRRSEH 120

Query: 123 SPAAVPADAWVLELGPRR-LSPPGFAPIALSEQDLTVLHELMRSAGEIASRQQIVQALGE 181
            P         LEL PRR  +  G   I L+ ++  +LH LMR AGE+ +R QI+  + +
Sbjct: 121 IPLPDVLRVSDLELDPRRHRAYRGNRRIDLTTKEFALLHVLMRQAGEVMTRTQIISLVWD 180

Query: 182 HYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRFHAR 225
                D   ++  I RLR KV + + + L I+T R  GY   AR
Sbjct: 181 MNFDCDTNVVEVSISRLRAKVDDQSEVKL-IHTIRGVGYVLEAR 223