Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 225 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  106 bits (265), Expect = 3e-28
 Identities = 82/229 (35%), Positives = 120/229 (52%), Gaps = 13/229 (5%)

Query: 1   MRDVILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDG 60
           M +++L++D+  L E L+ +L+  G++V A       R++   +     ++D+ LPDG G
Sbjct: 1   MSELLLIDDDQELCELLTSWLSQEGFQVRACHDGLSARKALADSAPAAVVLDVMLPDGSG 60

Query: 61  LVLIRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRRL 120
           L L+++LR     L +++L+ARG   DR+ GL++GAD YL+K  D  EL A L A+ RR 
Sbjct: 61  LELLKQLRNDHPELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR- 119

Query: 121 GDSPAAVPADAWVLELGPRRLSP-PGFAPIALSEQDLTV-----LHELMRSAGEIASRQQ 174
              PAAV      LELG    SP  G   I   E  LTV     L  L+R  GE   +Q+
Sbjct: 120 -SHPAAVSTQ---LELGDLCFSPVRGVVSIDEQEFALTVSESRLLEALLRQPGEPLDKQE 175

Query: 175 IVQ-ALGEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRF 222
           + Q ALG     YD R LD  +  LR+K+         I   R+ GY +
Sbjct: 176 LAQIALGRKLTLYD-RSLDMHVSNLRKKIGPHPDGRPRIVALRSRGYYY 223