Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 233 a.a., putative transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  105 bits (262), Expect = 7e-28
 Identities = 74/227 (32%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 1   MRDVILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDG 60
           M ++ L+ED++ L E ++ +L  N + V   A  +     Y   R  + ++DL LP  DG
Sbjct: 1   MPNIFLVEDDSALSELIASYLQRNDFHVQVIARGDHVLDEYRRQRPDLVILDLMLPGIDG 60

Query: 61  LVLIRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRRL 120
           L L R LR+  + L I++LTAR  + D+V GL++GAD Y++K  +   L A +  L RR 
Sbjct: 61  LQLCRLLRQESQTLPILMLTARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVRTLLRRS 120

Query: 121 GDSPAAVPADAWV-----LELGPRRLSPPGFAPIALSEQDLTVLHELMRSAGEIASRQQI 175
             +   +  D  +     ++L  R +S  G   + LS  +  +L  L R+AGE+ +R +I
Sbjct: 121 SVNEPRLDNDLILIGGLRIDLAERTVSWRG-EEVELSSGEYNLLVVLARNAGEVMNRDRI 179

Query: 176 VQALGEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRF 222
           +Q L     +   R +D  I +LRRK  +  G A  I T    GY F
Sbjct: 180 LQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGKGYLF 226