Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 225 a.a., two component system DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

 Score =  111 bits (277), Expect = 1e-29
 Identities = 77/223 (34%), Positives = 119/223 (53%), Gaps = 3/223 (1%)

Query: 4   VILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDGLVL 63
           ++++EDEA+LR  L   L  +G+ V+A A  E      +     +A++DLGLP   GL L
Sbjct: 3   LLVVEDEALLRHHLYTRLGESGHVVEAVADAEEALYQAEQYHFDLAIIDLGLPGISGLEL 62

Query: 64  IRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRR-LGD 122
           I  LR + +   I++LTARG  +D+V GL  GAD YL K    +EL A L AL RR  G 
Sbjct: 63  ITRLRSQDKTFPILILTARGNWQDKVEGLAAGADDYLVKPFQFEELEARLNALLRRSSGF 122

Query: 123 SPAAVPADAWVLELGPRRLSPPGFAPIALSEQDLTVLHELMRSAGEIASRQQIVQALGEH 182
           + + + A   VL+L  R+ +      +AL+  +  +L  LMR   ++ ++ ++++ L   
Sbjct: 123 TQSTIAAGPLVLDLN-RKQATLDEQALALTAYEYRILEYLMRHHQQVVAKDRLMEQLYPG 181

Query: 183 YLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGYRFHAR 225
               D   ++  + RLRRK+    G   PI+T R  GY F  R
Sbjct: 182 DEERDPNVIEVLVGRLRRKLEGERGFK-PIDTVRGLGYLFTER 223