Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  100 bits (249), Expect = 2e-26
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 9/227 (3%)

Query: 2   RDVILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALVDLGLPDGDGL 61
           + +++++D+  +RE L  +L+ +G++V AEA  +GFR + +     + ++D+ LPD DG 
Sbjct: 6   KSILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGF 65

Query: 62  VLIRELRE--RGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSRR 119
            L R +R+  R  R+ I++LTA     DRV GL++GAD YL K     EL A + AL RR
Sbjct: 66  SLCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRR 125

Query: 120 -----LGDSPAAVPADAWVLELGPRRLSPPGFAPIALSEQDLTVLHELMRSAGEIASRQQ 174
                     A +  D W L+    RL       + LS  D  +L   +    +I  R  
Sbjct: 126 TEFGQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRDT 185

Query: 175 IVQAL-GEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGY 220
           I  A  G   +  D R +D  + RLR+++ +       I T R +GY
Sbjct: 186 IGNATRGREPMPLD-RIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGY 231