Pairwise Alignments

Query, 230 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 6e-28
 Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 15/228 (6%)

Query: 4   VILLEDEAVLREELSEFLAGNGYRVDAEASLEGFRRSYDPARHGIALV--DLGLPDGDGL 61
           +++++D+  +RE L ++L   GY V A A  +  R     ARH + LV  DL LP  DGL
Sbjct: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQL--ARHKVELVVLDLMLPGEDGL 62

Query: 62  VLIRELRERGERLGIVVLTARGGARDRVTGLDIGADYYLSKTSDLDELAATLAALSR--- 118
            L R+L+     L +++L+A+G   DR+ GL++GAD YL+K  +  EL A + A+ R   
Sbjct: 63  SLCRQLQAT-PGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQ 121

Query: 119 RLGDSPAAVPADAWV-----LELGPRRLSPPGFAPIALSEQDLTVLHELMRSAGEIASRQ 173
           RLG S      DA +     LE   R L+ P    + L   D  VL EL+ +   + SR 
Sbjct: 122 RLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRD 181

Query: 174 QIVQ-ALGEHYLSYDQRRLDTQIRRLRRKVSEATGLALPINTARNAGY 220
           Q+ + A G  +L  D R +D  + RLR+++  A      I T RN GY
Sbjct: 182 QLTRSAFGRDHLP-DDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGY 228