Pairwise Alignments

Query, 287 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 289 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (298), Expect = 8e-32
 Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 11/291 (3%)

Query: 1   MESRRTEQDYRARVARAVAAIVADPMADHRLEDLARLAHFSPFHFHRVYASVAGETVAAT 60
           M    T   Y  R    +A I A+   D  ++ L+ +A+FS FHFHR + +  G TV+  
Sbjct: 1   MSDTPTNFAYTKRFNAVLAYIDANLEGDLSVKTLSHVANFSAFHFHRQFTAFVGVTVSRY 60

Query: 61  VRRVRLALAT-QLLEAGDQSITQVAMAVGYESPQAFTRAFGQFTGQSPRDFQRQMVRAVL 119
           V+ +RL  A  +L    D S+   A+  G+ESP+AF RAF +  G +P  F ++    V 
Sbjct: 61  VQLMRLRRAAHRLASLADHSVLDAALGAGFESPEAFCRAFRRAFGMTPSAFGKEPNWQVW 120

Query: 120 D-VDAMPQAGNDGSTAPTVRIVERQTQRLHALRHRGSFATIPHTHRRL---RLHAGTRVL 175
             V A+P      +    VRIVE    R+  L H G    +  + R+    R+ +G   +
Sbjct: 121 STVFAIPHFSR--TIIMQVRIVEFPEVRVATLEHCGPAGLVNESVRKFIEWRMQSGQSPV 178

Query: 176 --SEHWGASFSDPEDT--SGFRYYAAYASPEPWPEDDTDVELLDIPGGRYAVHRLAGPYA 231
             S  +G  + +P+ T    FR+       E    ++  V  + IPGGR  V R AG   
Sbjct: 179 ASSRTFGIPYGNPDTTPPQEFRFAICGEIHEAVASNEFGVHEIVIPGGRCVVVRHAGSPD 238

Query: 232 RINAAVQSLYARWLPGSGYEPDDRPTLEHYLNSPRTVSQADLRTDLLIPIR 282
            I   +  +Y  WLP SG E  D+P   HYL++     Q   +TD+ +P++
Sbjct: 239 HIGETIYPIYRDWLPASGEELRDQPLFFHYLSAYPETPQDQWQTDVYVPLQ 289