Pairwise Alignments

Query, 495 a.a., Serine protease from Variovorax sp. SCN45

Subject, 492 a.a., putative periplasmic serine endoprotease DegP-like from Pseudomonas putida KT2440

 Score =  399 bits (1024), Expect = e-115
 Identities = 211/455 (46%), Positives = 302/455 (66%), Gaps = 10/455 (2%)

Query: 47  APAAMVTLPDFSTITSRDGPAVVNISVTGTMKASDDEAAA-EIQGIDPDDPMF-QFFRRF 104
           A  A   LPDF+T+  +  PAVVNIS     K  D   AA ++  ++   PMF +FF R 
Sbjct: 39  AAQAEEALPDFTTLVEQASPAVVNISTK--QKLPDRRIAANQMPDLEGLPPMFREFFERN 96

Query: 105 QGQMNPRGQQQQRDVPVRAQGSGFIVDPSGIIITNAHVVKDAKEVTVKLTDRREFRAKVL 164
             Q  PR  +  R    ++ GSGFI+   G ++TN HVV DA E+ V+L+DR E +AK++
Sbjct: 97  MPQQ-PRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLV 155

Query: 165 GADAKTDIAVLKIDAKNLPVLALGNTKDLKVGEWVLAIGSPFGFENTVTAGVVSAKGRSL 224
           G D +TD+A+LK+D KNLP + LG+++ LKVGEWVLAIGSPFGF+++VT G+VSAKGR+L
Sbjct: 156 GTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTL 215

Query: 225 PDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGINSQIYSRSGGYQGLSFAIPIDVAIQV 284
           P+D+YVPFIQTDVA+NPGNSGGPL N +GEVVGINSQI++RSGG+ GLSFAIPIDVAI V
Sbjct: 216 PNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDV 275

Query: 285 KDQIVATGKATHGRLGVAVQEVNQAFADSFKLDKPEGALVSNIEKGGPGDKAGLKAGDVI 344
            +Q+   GK + G LGV +QEVN+  A+SF LDKP GALV+ + + GP  K GL+ GDVI
Sbjct: 276 SNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVGDVI 335

Query: 345 RKVNGQPIISSGDLPAVIGQQAPGKQVTLEVWRQGERQELQAKLGDASDKPAKV---AKA 401
             +NGQPI+ S DLP ++G    G++  LE+ R G+RQ L   +G   D    +    + 
Sbjct: 336 LSMNGQPIVMSADLPHLVGGLKDGEKAKLEIIRNGKRQNLDISVGALPDDDVDIGAGTEG 395

Query: 402 DADVGQGKLGLALRPLQPQEKREASVDNGLLIEDAA-GPSALAGVQAGDVLLAINGTPAQ 460
            A+    +LG+++  L  ++K+   +  G++I++   GP+A+ G++ GDV+  +N     
Sbjct: 396 SAERSSNRLGVSVADLTAEQKKSLELKGGVVIKEVQDGPAAMIGLRPGDVISHLNNQAIG 455

Query: 461 SVEQVREVVAK-ATNKSVALLIQRGEDKIFVPVRI 494
           S ++  E+  +   N+SV++ + R     F+  ++
Sbjct: 456 SAKEFTEIAKELPKNRSVSMRVLRQGRASFITFKL 490



 Score = 45.4 bits (106), Expect = 4e-09
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)

Query: 278 IDVAI-QVKDQIVATGKATHG-------RLGVAVQEVNQAFADSFKLDKPEGALVSNIEK 329
           +D+++  + D  V  G  T G       RLGV+V ++      S +L   +G +V    +
Sbjct: 375 LDISVGALPDDDVDIGAGTEGSAERSSNRLGVSVADLTAEQKKSLEL---KGGVVIKEVQ 431

Query: 330 GGPGDKAGLKAGDVIRKVNGQPIISSGDLPAVIGQQAPGKQVTLEVWRQGERQELQAKLG 389
            GP    GL+ GDVI  +N Q I S+ +   +  +    + V++ V RQG    +  KL 
Sbjct: 432 DGPAAMIGLRPGDVISHLNNQAIGSAKEFTEIAKELPKNRSVSMRVLRQGRASFITFKLA 491

Query: 390 D 390
           +
Sbjct: 492 E 492