Pairwise Alignments

Query, 401 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Variovorax sp. SCN45

Subject, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 12/234 (5%)

Query: 147 LVIDQDTHEVLFSKNDHAVLPIASLTKLMTGLL----ISEAHLPNEELITITQDDVDTEK 202
           +++D  +  VL   N    LP ASLTKLMT  +    I    +   + +T++++   T  
Sbjct: 41  VLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGG 100

Query: 203 RSSSRLTVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLSTFVSIMNAKAKMLGMKDT 262
            S   + VG+ ++  +LLH  ++ S N A+ AL     G    F  +MN  A  LGM ++
Sbjct: 101 -SRMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNS 159

Query: 263 RYVEPTGL-SSRNQSSAQDLALLVNAAYS-DATVRSLSTSPEYQVEVGNRMLQFNTTNRL 320
            ++ PTGL    + SSA D+A L  A  + D    ++ +  E+     N + Q N    L
Sbjct: 160 HFMNPTGLPHPEHYSSAHDMATLARAIINVDPAHYAIYSQKEF---FWNNIKQPN--RNL 214

Query: 321 VKSPDWEIGVQKTGYISEAGQCLVMQAKVAGRKLIMVFLDSAGKFSRIADAERV 374
           +   D  +   KTG+  EAG C+V  A   G++LI V   +  + SR A+ +++
Sbjct: 215 LLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKL 268