Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 220 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  119 bits (298), Expect = 5e-32
 Identities = 64/189 (33%), Positives = 107/189 (56%)

Query: 28  AASSIVLGMAIGVAGSLALVYGGKPLRGVTRVYVEFFRNTPALVQLFLIYFGLPNLGIRL 87
           +A +I+ G  IG+   L L YG   +R   R+YV+  R TP  V +   ++ LP LG ++
Sbjct: 29  SALAIIFGTLIGIVAGLILTYGKFWMRAPFRLYVDLIRGTPVFVLVLACFYMLPALGWQI 88

Query: 88  EAPVAGVISLALYCGAYMVEVFRSGLMSVPRGLSEAGAALGLRPRQVLVHVLFVPALRNV 147
            A  AG + L L+CG+++ E+ R  L ++PRG  EAG A+GL   Q L +VL   ALR +
Sbjct: 89  TAFQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFYQSLGYVLLPQALRQI 148

Query: 148 FPSLASQMVLTLIGTSLISQIGVEDIFHAGSFIDSRTFRSFEVYLVICAMYFVAVQALRV 207
            P+  +     +  ++L+S IGV ++  +   + +RTF + E YL    M+FV   A+ +
Sbjct: 149 LPTWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFMFFVINYAIEL 208

Query: 208 ILGFVQRRL 216
              ++++R+
Sbjct: 209 FGRYIEKRV 217