Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 1e-33
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 1/202 (0%)

Query: 15  GQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVYVEFFRNTPALVQLF 74
           G L  GL  TL  +  S  LG+ IG+   L  +     LR ++ VYVE  R TP LVQ+F
Sbjct: 116 GPLAWGLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIF 175

Query: 75  LIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGLSEAGAALGLRPRQV 134
           + YF +  + + L    AGV +LAL+ GAY+ E+ R+G+ S+ +G +EA  +LGL   Q 
Sbjct: 176 IFYFFIGTV-LNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQS 234

Query: 135 LVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSFIDSRTFRSFEVYLVI 194
           + HV+   A + V P LA Q +  +  TSL+S I + ++  +G    + +F +FE++  +
Sbjct: 235 MRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCV 294

Query: 195 CAMYFVAVQALRVILGFVQRRL 216
             +Y +    L  I   ++RRL
Sbjct: 295 AGLYLLINLPLSHIASRLERRL 316