Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  115 bits (287), Expect = 8e-31
 Identities = 71/205 (34%), Positives = 111/205 (54%), Gaps = 12/205 (5%)

Query: 16  QLVEGLLHTLGYA----ASSIVLGMAIGVAGSLALVYGGKPLRGVTRVYVEFFRNTPALV 71
           +L    L+T+G      A +IVLG+ + +    A ++   P+ GV    +EF R+TP L+
Sbjct: 15  ELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGV----IEFIRSTPLLI 70

Query: 72  QLFLIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGLSEAGAALGLRP 131
           Q++ +Y+ LPN G+ L A   GV+ + L+   Y+ EV+RSGL +VPRG  EA  AL + P
Sbjct: 71  QVYFLYYVLPNYGVSLTAMQVGVLGIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNMSP 130

Query: 132 RQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSFIDSRTFRSFEVY 191
                +++   ALR + P + + +V  L  T ++S I V +I      I S TFR    Y
Sbjct: 131 SLAYRNIILPQALRPILPPVGNYLVAMLKDTPVLSAITVVEIMQQAKNIGSETFR----Y 186

Query: 192 LVICAMYFVAVQALRVILGFVQRRL 216
           L    M  V   AL ++L ++ RR+
Sbjct: 187 LEPITMVGVFFLALSIVLAYLVRRV 211