Pairwise Alignments

Query, 530 a.a., Membrane-bound lytic murein transglycosylase D from Variovorax sp. SCN45

Subject, 476 a.a., Membrane-bound lytic murein transglycosylase D from Pseudomonas putida KT2440

 Score =  280 bits (716), Expect = 8e-80
 Identities = 187/486 (38%), Positives = 259/486 (53%), Gaps = 55/486 (11%)

Query: 4   IAATCLAGSLVLAGCAGTNN-SSAPSSSSPNAGATAGGSASPVYPRDALSPLATSQAHSQ 62
           I+A  LA +LV  GC  T     + S  + N  A      SP+  + A       QA   
Sbjct: 20  ISALALAATLV--GCQSTRQLDESDSVRAHNYQARIKHKPSPLLVKPA------EQA--- 68

Query: 63  SVVTLAPPADMWDRIRRGFKMPN-LD-NDLVRDREQWYASRPDYIQRMTERSNKYIFHIV 120
                  P D+W+R+R+GF + + +D N  +  +  W+AS P +I+   ER + Y+ +IV
Sbjct: 69  -------PQDVWERMRQGFALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHYIV 121

Query: 121 EELERRNMPTELALLPYIESAFNPQAISSARAAGMWQFMPATGTDFDLKQNIFRDDRRDV 180
           E LE R+MP ELALLP IESA+NP A S A AAGMWQFMPATG  F+L+Q  F D RRDV
Sbjct: 122 ERLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGRRDV 181

Query: 181 VASTRAALDYLQKLYGMF-GDWQLALAAYNWGEGSVSRAIAKNQRLGLPTTYSDLTMPAE 239
            AST AALDYL +L+ MF GDW LALAAYN GEG+VSRAI +N+RLGLPT Y +L +P E
Sbjct: 182 TASTNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQE 241

Query: 240 TRMYVPKLQAVKNIVANPQAFNTELPLIANHPYFQTVTLTRDLDVELAAKLADVRLEDFR 299
           TR YVPKL A+  +V+ P+A+   L  IAN PYF+ V +   LD+   A  A++  ++  
Sbjct: 242 TRDYVPKLLALSQVVSTPEAYGVNLTPIANEPYFEAVAINDRLDLSRVAAFANIDEDELI 301

Query: 300 ALNPAAHKPVLIAAGTPQILLPWDNAAVFQRNFDAYSQGQYASWTAWVVPNTMTVADA-- 357
            LNPA  K + +  G  Q+L+P   A +   +    +  Q  S           VA+A  
Sbjct: 302 QLNPAFKKRMTV-DGPKQLLVPTAKAQLLSASLSNLNPEQLVSLQPPKAAFARAVAEAKA 360

Query: 358 ------------------AQRSGMSEADLRAINNVPPRMLIKAGSTLLVPRGARVKEDVA 399
                             A+ + +S  D++  N +    L +AG  L + RG        
Sbjct: 361 PVGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSL-RAGQVLAL-RGGSAPSAAG 418

Query: 400 AVVADDGHLSFQPEIVTRRTTVKAGRADSVATIARRYNLKPNNVAEWNDVKPNHAFKRGY 459
             VA  G          R T  K  + DS+  +A+R+N++  ++  WN  +  HA K G 
Sbjct: 419 NRVAASG---------KRSTQYKVRKGDSLYLVAKRFNVEMKHLKRWNP-RSGHALKPGQ 468

Query: 460 SVVVYL 465
           ++ VYL
Sbjct: 469 TLTVYL 474