Pairwise Alignments
Query, 530 a.a., Membrane-bound lytic murein transglycosylase D from Variovorax sp. SCN45
Subject, 1017 a.a., hypothetical protein from Acinetobacter radioresistens SK82
Score = 236 bits (602), Expect = 3e-66
Identities = 130/341 (38%), Positives = 188/341 (55%), Gaps = 4/341 (1%)
Query: 9 LAGSLVLAGCAGTNNSSAPSSSSPNAGATAGGSASPVYPRDALSPLATS---QAHSQSVV 65
L GS + A T SS P++S G D+L L ++ +A +
Sbjct: 21 LLGSAIAALGMTTGCSSTPANSKTIKSNQVGSGLLDASSLDSLEDLLSATDMRAVEGDRL 80
Query: 66 TLAPPADMWDRIRRGFKMP-NLDNDLVRDREQWYASRPDYIQRMTERSNKYIFHIVEELE 124
+ D+W R+ GFKM N + + + W+ SR Y+ R++ R+++Y++H V+E E
Sbjct: 81 LILKHGDVWKRMTVGFKMDLNHWDSRIEAQRSWFISRQPYLDRLSARASRYLYHTVKEAE 140
Query: 125 RRNMPTELALLPYIESAFNPQAISSARAAGMWQFMPATGTDFDLKQNIFRDDRRDVVAST 184
RR +PTELALLP IES+++P A SSA AAG+WQF+P+TG + LKQ D RRDVV ST
Sbjct: 141 RRGLPTELALLPVIESSYDPAATSSAAAAGLWQFIPSTGKIYGLKQTSLYDGRRDVVEST 200
Query: 185 RAALDYLQKLYGMFGDWQLALAAYNWGEGSVSRAIAKNQRLGLPTTYSDLTMPAETRMYV 244
RAA ++L LY FG W+LALAAYN G G + +AI +N+ GLPT Y L +P ET YV
Sbjct: 201 RAAYEFLGSLYNQFGSWELALAAYNAGPGRIQQAINRNRAAGLPTDYWSLKLPQETMNYV 260
Query: 245 PKLQAVKNIVANPQAFNTELPLIANHPYFQTVTLTRDLDVELAAKLADVRLEDFRALNPA 304
P+ AV I+ NP A+ LP IAN P+F+ V L + + + + + + ALNP
Sbjct: 261 PRFLAVAQIIKNPSAYGVSLPPIANRPHFREVNLNGGVGLNQVSSITGLSRAELYALNPG 320
Query: 305 AHKPVLIAAGTPQILLPWDNAAVFQRNFDAYSQGQYASWTA 345
+ A +IL+P D + + + G W +
Sbjct: 321 HRGEYVDPASPMRILIPADLSPAIDTKLRSLNSGSGGLWAS 361
Score = 43.9 bits (102), Expect = 3e-08
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 26/143 (18%)
Query: 321 PWDNAAVFQRNFDAYSQGQYASWTAWVVPNTMTVADAAQRSGMSEADLRAINNVPPRMLI 380
P + V +N S G + + V N ++ A R G+S +L +NN+ R +
Sbjct: 898 PVEKETVTAKNSKNNSSGSHRDTERYTVKNGESLNTIASRVGISVKELAELNNLESRAGL 957
Query: 381 KAGSTLLVPRGARVKEDVAAVVADDGHLSFQPEIVTRRTTVKAGRADSVATIARRYNLKP 440
G LL+P+ T+ R D++ +A +Y +
Sbjct: 958 LRGQNLLIPKTV--------------------------TSYTVKRGDTLIGLANKYGMNT 991
Query: 441 NNVAEWNDVKPNHAFKRGYSVVV 463
+ +AE ND++P+ + G + V
Sbjct: 992 SELAEMNDIQPSTQLRIGEVIKV 1014
Score = 35.0 bits (79), Expect = 1e-05
Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 62/217 (28%)
Query: 353 TVADAAQRSGMSEADLRAINNVPPRMLIKAGSTLLVPRGARVKEDVAAVVAD-------- 404
T+ A +S +S ++L +NN+ ++ G TL VP GA + ++ D
Sbjct: 801 TLTSIAAQSKVSVSELAQLNNINTGSGVRIGQTLKVPAGASMPDEYIVQPGDTLTSVAGK 860
Query: 405 ----------------------------DGHLSFQPEIV--------------------T 416
DG L P V T
Sbjct: 861 YHLQVNFLAGLNGLNRNSGLRVGQKIKLDGELPVSPAPVEKETVTAKNSKNNSSGSHRDT 920
Query: 417 RRTTVKAGRADSVATIARRYNLKPNNVAEWNDVKPNHAFKRGYSVVVYLPIRATVASRVG 476
R TVK G +S+ TIA R + +AE N+++ RG ++++ + + R
Sbjct: 921 ERYTVKNG--ESLNTIASRVGISVKELAELNNLESRAGLLRGQNLLIPKTVTSYTVKRGD 978
Query: 477 TGIPPARGHAVASSKHATAKAGAP----RGANIAKVP 509
T I A + + +S+ A P R + KVP
Sbjct: 979 TLIGLANKYGMNTSELAEMNDIQPSTQLRIGEVIKVP 1015
Score = 32.3 bits (72), Expect = 9e-05
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 12/146 (8%)
Query: 353 TVADAAQRSGMSEADLRAINNVPPRMLIKAGSTLLVPRGARVKEDVAAVVADDGHLSFQP 412
T+A A ++G+S D+ N + P + G++L + K + V A +P
Sbjct: 587 TLAVIAMKNGVSWRDVAKWNQIDPSATLYVGTSLYLYDANPQKVEEKTVKAS------KP 640
Query: 413 EIVTRRTTVKAGRADSVATIARRYNLKPNNVAEWNDVKPNHAFKRGYSVVVYLPIRATVA 472
E VKA DS+ ++A ++ L +A+WN++ G + + A VA
Sbjct: 641 ETYL----VKAN--DSLTSVADQFGLSLKQLADWNNLSVTSGLFVGQKLQLKDNPNAAVA 694
Query: 473 SRVGTGIPPARGHAVASSKHATAKAG 498
V +K T K G
Sbjct: 695 KPVKVADTRVTAEQRIKTKSYTVKRG 720
Score = 31.2 bits (69), Expect = 2e-04
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 417 RRTTVKAGRADSVATIARRYNLKPNNVAEWNDVKPNHAFKRGYSVVVY 464
+R+T D++A IA + + +VA+WN + P+ G S+ +Y
Sbjct: 576 KRSTYTVQPGDTLAVIAMKNGVSWRDVAKWNQIDPSATLYVGTSLYLY 623
Score = 28.5 bits (62), Expect = 0.001
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 344 TAWVVPNTMTVADAAQRSGMSEADLRAINNVPPRMLIKAGSTLLVP 389
T++ V T+ A + GM+ ++L +N++ P ++ G + VP
Sbjct: 970 TSYTVKRGDTLIGLANKYGMNTSELAEMNDIQPSTQLRIGEVIKVP 1015