Pairwise Alignments

Query, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 338 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 9/218 (4%)

Query: 4   RRTLISASAIAAATIALPRVFAQQAKLEKTKVSIAVGGKAAFYYLPLTISEQLGYFKAEG 63
           RR+++ A A AAA +    + A  A+ +  K++ A   +A F   P+ ++ + G+F+  G
Sbjct: 12  RRSVLQAGA-AAAIVGSGALLASVARSQPRKLTFA-WSQAGFCLAPVPVALERGFFEKNG 69

Query: 64  LDVEISDFAGGA-RALQAVVGGSADVCSGAYEHTIN-LQAKNQFFQAFVLQGRAPQIAVG 121
           LDVE+ ++AG + + L+A+  G AD+  G     +  L+A         + G   ++ VG
Sbjct: 70  LDVELLNWAGSSDQMLEALATGKADLGVGLIHRWVKPLEAGFDVKVVGSVHGGCLRL-VG 128

Query: 122 VSTKNMAGYTG-IQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGVAAGAL 180
                 AG T  +  LKGK IGVS   S       + L++ G+         V  A    
Sbjct: 129 AKA---AGVTAELASLKGKTIGVSDQNSPARQFYAIHLAKKGIDVDKDVDWRVYPADLLD 185

Query: 181 TALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKG 218
            A++ G+I AI++ DP + ++E++          + KG
Sbjct: 186 VAVKKGEIQAIADGDPNVFLIEKRNPGVFTEIANSAKG 223