Pairwise Alignments

Query, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 62  EGLDVEISDFAGGARALQAVVGGSADVCSGAYEHTINLQAKNQFFQAFVLQGRAPQIAVG 121
           +G+ V   +FA G + L+A+  G+ D+   A   ++  QA  +       +   P+  +G
Sbjct: 67  QGVKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPR-GIG 125

Query: 122 VSTKNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGVAAGALT 181
           +  +       +QDLKGK++      ++  ++A + L + GL   D++   V  AA A+ 
Sbjct: 126 LVVREQDHLASVQDLKGKRVATGRGWNAQYLLA-VALQQAGLSYKDITPAYVNNAADAVA 184

Query: 182 ALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKGTQQVFGGT 226
           AL+SG + A++  DP +   E +  +K + D   L   +  +  T
Sbjct: 185 ALQSGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLST 229