Pairwise Alignments

Query, 345 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 321 a.a., Putative aliphatic sulfonates-binding protein from Acinetobacter radioresistens SK82

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 12/201 (5%)

Query: 60  KAEGLDVEISDFAGGARALQAVVGGSADVCSGAYEHTINLQAKNQFFQAFVLQGRAPQIA 119
           K++G+ +   +F  G + L+ +  GS           I  QA N        Q  AP   
Sbjct: 61  KSQGIKIRWVEFPAGPQLLEGLNVGSVAFGEAGEAPPIFAQAANSNIVYVANQPGAPHGE 120

Query: 120 VGVSTKNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGVAAGA 179
             V  KN +    + DLKGK+I ++  GS+ + +   +L    LK  D+  + +   A A
Sbjct: 121 ALVVQKN-SPIQSVADLKGKRIALNK-GSNVHYLLLNILEANDLKLEDIQVVYLP-PADA 177

Query: 180 LTALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKGTQQVFGGTMPAACLYASTEFI 239
             A   G +DA    DP +   EQ+   +++ D + L    Q +          A  +F 
Sbjct: 178 RAAFERGSVDAWVIWDPFLAAAEQQLGARVLKDGQGLVNNLQFY---------LADRKFA 228

Query: 240 QKNPNTCQALANAIVHGLKWL 260
           + NP   Q +   +    +W+
Sbjct: 229 ESNPKVIQTIIQELNTTTQWV 249