Pairwise Alignments

Query, 623 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 36/213 (16%)

Query: 39  HAYLFTGTRGVGKTTVSRILAKSLNCQGPDGQGGITATPCGVCQACRDIDSGRFVDYT-- 96
           HA+L  G  G+G+  ++  LA +  C+ P  +G    T CG C +C  I+     D    
Sbjct: 23  HAWLLQGPSGIGQYELALALASAWLCEQPTAEG----TACGHCASCHAIEVRTHADLCVL 78

Query: 97  -----------ELDAASNRGVDE-------------VQSLLEQAVYKPVQGRFKVFMIDE 132
                       LD  +   +D+             ++  +  A     +GR KV ++  
Sbjct: 79  MPEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVYP 138

Query: 133 VHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNLRPMAPETVLEHL 192
              +     NA+LKTLEEP   ++FVLA+    ++  T+ SRCL F L    PET     
Sbjct: 139 AERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFTL--PWPETA--EA 194

Query: 193 TGVLQTENVPAEPQALRLLARAARGSMRDALSL 225
              L  ++VPA   A   L RAA G   DAL L
Sbjct: 195 EAWLAAQDVPAADAA--ALLRAAGGRPSDALRL 225



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 13/160 (8%)

Query: 183 MAPETVLEHLTGVLQTENVPAEPQALRLLARAAR-GSMRDALSLTDQAIAFGNGELVETG 241
           + PE  ++ L   L  +         R  +R  R  +MRDA+    +  A G G++V   
Sbjct: 78  LMPEVAMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVY 137

Query: 242 VRQMLGSVDRGHVFRLIEALAQGDGKTVVETSEALRVDGMSAASTLEEMTAVLQAMAVLQ 301
             + + ++    + + +E    GD + V+ +  A ++        L  + +      +  
Sbjct: 138 PAERMNTITANALLKTLEE-PVGDVRFVLASEAAWQL--------LPTIRSRCLGFTLPW 188

Query: 302 AVPSRAESADAATDPDAADTA---RLAALMPADETQLLYS 338
              + AE+  AA D  AAD A   R A   P+D  +L  S
Sbjct: 189 PETAEAEAWLAAQDVPAADAAALLRAAGGRPSDALRLARS 228