Pairwise Alignments

Query, 854 a.a., Helicase from Variovorax sp. SCN45

Subject, 1061 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 70.1 bits (170), Expect = 7e-16
 Identities = 160/649 (24%), Positives = 241/649 (37%), Gaps = 97/649 (14%)

Query: 227 AETAASHVALDPEDEAERAAACVLRHLAEDRAP-----VALVATDRALTRRISAQLKAQG 281
           A  AA+ +    + E   A A  LR   E   P      AL+  DR L RR++ +L+  G
Sbjct: 355 AFAAATLIEAANQREEATAIAVALRLALEAPGPGRPSQAALITPDRGLARRVATELQRFG 414

Query: 282 VITHDETGWKLSTTRAAATLMSSLRACTHDASSDQVLEWLKS-----GADGDALIIQS-- 334
           +   D  G  LS T  A     +L A         ++  LK      G  GDA    S  
Sbjct: 415 IEADDSAGTPLSATPQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSGDAFTKASKA 474

Query: 335 LEARLRREGVRDWSAWSAWCALVA-----RSEKPHDATLMTFTE-AIEARRAPMTR---- 384
           LE    R G  +    +    L A     R  +   A  +   E +++A R    R    
Sbjct: 475 LELIALRGGRVETEIGNLEVVLDAQLLAQRDNRHPPAWRVALPEGSVDAARDLARRIAIA 534

Query: 385 SRPLAEWLRALRELLEAGEQWEPLSEDMAG--GKVIGALWLD---------AGAHGDD-- 431
           + PL            A     PLS D AG  G+VI A+  D         +G  GD   
Sbjct: 535 TEPLGSAFIRRDRSGRAFTDKLPLS-DWAGRTGRVIEAICADDSNDLAALWSGEAGDKLS 593

Query: 432 ----EEFPGGRHTLAEFTAWVR--DVLEDASFVPPAGDQAPKVVVLPLYQLLGRAFGAVV 485
               E    G    A+   W+     L     + P   + P++ +    +   ++   VV
Sbjct: 594 SLFAELMESGDILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVV 653

Query: 486 IPGCDDRRLPASPEPPGNWSAAQRADLGLPSRDALEAAQRAAWAMALHNPSCELLWRQSD 545
           I G ++   P         S + +  +GL   +         + MA  N + ++ + ++ 
Sbjct: 654 IGGLNEGLWPGQTANNPFLSRSMKTAIGLEPPERRIGQLAHDFEMA--NGTRQIFYTRAL 711

Query: 546 ANGE-PVRPSPLVQAL------HLDHALRPA----------TDPRLPREVAVQPTEYPKP 588
             G  P   S  +Q L      +    LR             D  + +E A +P   PKP
Sbjct: 712 RQGSTPAVASRWLQRLLALGGENFAEQLRKRGETYRHWAGLMDESIDQETAKRPA--PKP 769

Query: 589 SGALLPLQNISTSVYEDLRRCPYRFFALRQLGLRSADELDAEVDKRDFGNWLHAVLGHFH 648
              L P ++ S S    LRR PY  +A R L L   D  + + +  D G   H ++  + 
Sbjct: 770 PADLQP-KSYSFSEVGRLRRDPYAIYARRILKLDPLDPFNRDPNAADRGTLYHGIIERYS 828

Query: 649 QA--LTETPTQDAQERAAFIEEAARRATRELGLSDAEFLP------FAAAWPAVRDGYLQ 700
           +   +  TP            EA +R   +    DAE LP      +   + AV   ++ 
Sbjct: 829 REGHIPGTPAS---------LEAMQRILDDC--FDAENLPVHVDVIWRPRFAAVARAFID 877

Query: 701 W-LTGHEASGAVFVESEPWKEQPLGDLRLIGRLDRIDRMPDGQPFVIDYKTESA-SVSKE 758
           W    H +    F E+   +E     +RL G  DRID    GQ  +IDYKT  A SV++ 
Sbjct: 878 WEKERHPSIRRSFFEARAGQEIAEAGIRLTGVADRIDIKTSGQADIIDYKTGLAPSVNQA 937

Query: 759 RVKDPTEDTQLAFYAALVADDTLRAAYVNVGEKSSGTQTVEQPAVVEAR 807
           R      D QLA  AA +    +R A+     + +G+ T E    V  R
Sbjct: 938 RA---LLDPQLALEAAAL----MRGAF-----RETGSPTPENLIYVRLR 974