Pairwise Alignments

Query, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 225 a.a., transcriptional activator protein from Pseudomonas putida KT2440

 Score =  194 bits (492), Expect = 2e-54
 Identities = 106/225 (47%), Positives = 142/225 (63%), Gaps = 1/225 (0%)

Query: 1   MRILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGL 60
           M++L+ ED+ K    L +GL E GF VD V T  +  + A   +YDL++LD M+PG +G 
Sbjct: 1   MKLLVAEDEPKTGAYLQQGLAEAGFTVDRVLTGTDALQHALSESYDLLILDVMMPGLEGW 60

Query: 61  TLCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLRR-S 119
            + R +R  G   PVL LTARD + DRV GL  GADDYL KPFAF ELLARVR LLRR +
Sbjct: 61  EVLRMVRAAGKDVPVLFLTARDGVDDRVKGLELGADDYLIKPFAFSELLARVRTLLRRGT 120

Query: 120 EIMRPMVLTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQVW 179
                  + +ADL +D L +R  R G  +DLT KEF++L++L+R  GEV+ +S +A QVW
Sbjct: 121 STAAQTTMKMADLEVDLLKRRATRSGKRIDLTAKEFSLLELLMRRRGEVLPKSLIASQVW 180

Query: 180 KDDLIAIDNLIDVHIGNLRRKVDAPPAPPLIHTVRGRGFRLALAE 224
             +  +  N+I+V I  LR K+D   AP LIHT RG G+ +   E
Sbjct: 181 DMNFDSDTNVIEVAIRRLRAKIDDDFAPKLIHTARGMGYMMDAPE 225