Pairwise Alignments

Query, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 226 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 5e-51
 Identities = 100/221 (45%), Positives = 131/221 (59%), Gaps = 1/221 (0%)

Query: 2   RILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGLT 61
           R+L IEDD    + +   L   G  VD      EG  +A    YDLI LD MLP  DGLT
Sbjct: 3   RVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIAGGYDLITLDRMLPEVDGLT 62

Query: 62  LCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLRRSEI 121
           +   LR     TP+LM++A   + +RV GL  G DDYLTKPFA DE+ ARV  LLRR+ +
Sbjct: 63  IVTTLRNLKIATPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRNSV 122

Query: 122 MRPMV-LTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQVWK 180
                 L +ADL LD +S    RG   L+L   E+ +L+ L+RH+G+V++R  + E+VW 
Sbjct: 123 PTTQTRLQVADLQLDLISHEARRGDNTLNLLPTEYKLLEYLMRHSGQVITRMMIFEEVWG 182

Query: 181 DDLIAIDNLIDVHIGNLRRKVDAPPAPPLIHTVRGRGFRLA 221
                  NLIDVHIG LR+K+D+P   PLI TVRG G+ +A
Sbjct: 183 YHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAIA 223