Pairwise Alignments

Query, 450 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

Subject, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

 Score =  169 bits (427), Expect = 2e-46
 Identities = 131/450 (29%), Positives = 199/450 (44%), Gaps = 11/450 (2%)

Query: 3   APSGERGLIARHAGTVLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLM 62
           AP+ E   + R AG ++  QLA M   +TDT++  R S  ALA   +GAA +  V +  +
Sbjct: 4   APTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCL 63

Query: 63  GVLQALLPVWAELHGAGRSNEVGRSVRQSLYLAAIAIVVGMAALLAPAAVLRLTQVPPEM 122
           GV+ A+  + A   GA       R  +  L+LA    +     L     VL L    PE 
Sbjct: 64  GVIAAVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPEN 123

Query: 123 RGDVEMYLRVLAFALAPALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGA 182
                 +L +L  AL   L F        +LG+   V  + L    +    ++    G  
Sbjct: 124 VASAAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMF 183

Query: 183 GLPAMGLVGCGWATLCVNWAMLACAIWLLRSSPFYRGYRLWERLEKPDWHQIRLFAKLGV 242
           GLP +GL+G G  T  V+  M       +R  P Y  Y L + L +P    +R   +LG+
Sbjct: 184 GLPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGL 243

Query: 243 PGGLAVLVEVTSFTLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWL 302
           P G   +VEV  F   AL +  LG+   AAHQIA  +++ A+MVP  LS A + RV  + 
Sbjct: 244 PIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYY 303

Query: 303 GAGDAMRARHACRLGFEQTVLCALLFSTALVTFRHPLANVYSD--NPAVVAL---AASLM 357
           GAG+ + AR A R+G     +    F+T  +     L  ++ D  +PA  A+   A  L+
Sbjct: 304 GAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQLL 363

Query: 358 LAVAAYHLADAMQTLCVFLLRCYRVTLAPLVIYCTMLWGLGLGGSYLLAYHGLGPWTAMR 417
           +  A + L D MQT+ +  +R  +      +I     W +G   ++L  +      T   
Sbjct: 364 MVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTF------TLGG 417

Query: 418 SPLAFWMMSAGALALTAMFFISLLRWTMKK 447
             +  W   A  LA  A+       W MK+
Sbjct: 418 GAVGIWWGLALGLACAAVALTFGFEWRMKR 447