Pairwise Alignments

Query, 450 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

Subject, 447 a.a., MATE family efflux transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  140 bits (354), Expect = 6e-38
 Identities = 111/402 (27%), Positives = 190/402 (47%), Gaps = 24/402 (5%)

Query: 18  VLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLMGVLQALLPVWAELHG 77
           V++ QL  +   V D+++ G+     LAA S+G +IF    V  +GV  ++ P+ A   G
Sbjct: 20  VVLSQLGHILVSVFDSLMVGQTGTLPLAAASLGNSIFTITLVFGLGVSYSITPLIAAADG 79

Query: 78  AGRSNEVG----RSVRQSLYLAAIAIVVG------MAALLAPAAVLRLTQVPPEMRGDVE 127
                 +       +  ++ L  +  +VG      +  L  PA V+ L  VP        
Sbjct: 80  RHNYTRISLLLLNGLVSNVLLGILLFIVGYFLSPYITVLDQPANVVELA-VP-------- 130

Query: 128 MYLRVLAFALAPALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGAGLPAM 187
            Y+ VL  ++ P ++F+ F    + L   +   ++ + +  + + L+    FG  G   M
Sbjct: 131 -YINVLFLSMVPLMVFQAFRQFAEGLSLTKQAMYISIVANALNIVLNYILIFGKLGFEPM 189

Query: 188 GLVGCGWATLCVNWAM-LACAIWLLRSSPFYRGYRLWERLEKPDW-HQIRLFAKLGVPGG 245
           GL+G GWATL     M LA A W+L +  F   +R + RL    + H  R++ KLG+P  
Sbjct: 190 GLLGAGWATLISRVVMALAMAAWVLYAKRF-AVFRRFLRLRHLSFIHMYRIY-KLGLPIS 247

Query: 246 LAVLVEVTSFTLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWLGAG 305
             ++ E+ +F+  A+ I  LG    AAHQIA N+ +V YM+   ++ A + RV    G G
Sbjct: 248 GQMIFEMGAFSFSAIMIGWLGARELAAHQIAINIASVTYMMASGIAAAATIRVGNQKGLG 307

Query: 306 DAMRARHACRLGFEQTVLCALLFSTALVTFRHPLANVYSDNPAVVALAASLMLAVAAYHL 365
           +    R A        V+  +     +V F++ +  +Y D+PAV+ LA+ L++  A + +
Sbjct: 308 NFDAMRMAGFSNIAMGVVFMIGSGLLMVLFKNYIPMLYIDDPAVIQLASGLLVIAALFQI 367

Query: 366 ADAMQTLCVFLLRCYRVTLAPLVIYCTMLWGLGLGGSYLLAY 407
           +D +Q + +  LR       P +I     W +GL   Y L +
Sbjct: 368 SDGIQVVGLGALRGLEDVRIPSLISLVAYWVIGLPVGYFLCF 409