Pairwise Alignments

Query, 450 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

Subject, 451 a.a., Multidrug resistance protein NorM from Acinetobacter radioresistens SK82

 Score =  194 bits (494), Expect = 4e-54
 Identities = 126/405 (31%), Positives = 205/405 (50%), Gaps = 8/405 (1%)

Query: 18  VLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLMGVLQALLPVWAELHG 77
           +LV Q A    G+ DTI+AG  S   LAA++VG  +++ + +   G++ A  P+ AE +G
Sbjct: 21  ILVTQFAQAGLGLIDTIMAGHLSPTDLAAIAVGVGLWIPIMLLFSGIMIATTPLVAEANG 80

Query: 78  AGRSNEVGRSVRQSLYLAAIAIVVGMAALLAPAAVLRLTQVPPEMRGDVEMYLRVLAFAL 137
           A   N +    RQSL++A +  ++ M  L     +L L  VP  ++    ++L  + F +
Sbjct: 81  ARDFNNIPTIARQSLWMAFMLGILAMLVLQLMPFLLPLFGVPENLQPKAGLFLHAIGFGM 140

Query: 138 APALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGAGLPAMGLVGCGWATL 197
               ++      +++LG P+ VT + L +L V +PL++ F +G   +PA+G  GCG+AT 
Sbjct: 141 PAVTMYAALRGYSEALGYPRPVTAISLLALLVLVPLNMIFMYGLGPIPALGSAGCGFATS 200

Query: 198 CVNWAMLACAIWLLRSSPFYRGYRLWERLEK--PDWHQIRLFAKLGVPGGLAVLVEVTSF 255
            + W ML      +     YR  +++ + EK  P W   +   KLG P GLA+  EV+ F
Sbjct: 201 ILQWLMLIALAGYIYKGHAYRKTQVFSQWEKFNPVW--AKRILKLGFPIGLAIFFEVSIF 258

Query: 256 TLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWLGAGDAMRARHACR 315
           +  A+ ++ LG    AAHQIA ++ +  +M+P+SL+IA + RV  + G  +    R    
Sbjct: 259 STGAIILSPLGETVVAAHQIAISVTSQLFMIPMSLAIALTIRVGMYYGEKNWHAMRKVQH 318

Query: 316 LGFEQTVLCALLFSTALVTFRHPLANVYSDNPAVVALAASLMLAVAAYHLADAMQTLCVF 375
           LG     + A+L    +  FR  +  VY+ + AV  +A  L+L   AY L DA Q     
Sbjct: 319 LGLITATVFAVLTMLVMWIFRSEIVAVYTRDLAVTHMALYLILFAIAYQLMDAWQVSAAG 378

Query: 376 LLRCYRVTLAPLVIYCTMLWGLGLG-GSYLLAYHGLGP---WTAM 416
            LR  + T  P+ I     W +    G YL  +  +G    WT +
Sbjct: 379 CLRGMQDTKGPMWITLLAYWVIAFPVGIYLARFTRMGAAGVWTGL 423