Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  114 bits (284), Expect = 3e-30
 Identities = 67/239 (28%), Positives = 126/239 (52%), Gaps = 2/239 (0%)

Query: 16  VLSIVVLLAVWEGAILLFKIPPFVLPSLGSIVQH--AFTDTGRLMAALLATLGEALGGYA 73
           +L+ + LL +WE A  +  +     P   SIV    A   +G L   LLA+L     G  
Sbjct: 15  LLTPLALLGLWEAAARMGLVDARFFPPPSSIVHTFGALVASGELWTNLLASLRRLFLGML 74

Query: 74  LGSILGLLLAVLLLLAPPLERVVMPLAVAVNAVPTVAYAPLFLIWFGLGAASKIALVALA 133
           LG +  L L + + ++ PL   + PL  A   +P  A  PL L+ FGLG  SK+ +VAL 
Sbjct: 75  LGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKVVMVALG 134

Query: 134 VGFTMLVNALHGLKQADAAAVNLMRSFGAGPLKIVWRLRLPVAMPSVVTALRIGVPRSMI 193
             + +L+N + G+   D   +++  ++ A   ++   + LP A+PS++  +++ +   +I
Sbjct: 135 AFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAMGMGLI 194

Query: 194 VAIVGEMLGAYAGLGRMIYESTQQVDLLSVWSAVLIASVASMVFYGLLVWIDQKLVWWR 252
           +  + EM+ A  G+G MI+ + Q + + +++  +L+ ++   VF  +L  I++ L+ W+
Sbjct: 195 LIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERMLIPWK 253