Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 256 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  107 bits (267), Expect = 2e-28
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 37  PFVLPSLGSI--VQHAFTDTGRLMAALLATLGEALGGYALGSILGLLLAVLLLLAPPLER 94
           P +LPS   +  V      +G     L A+L   LGGY L S L + LA+++    PL +
Sbjct: 36  PVLLPSPAEVAGVLGEVIGSGAFHRDLGASLRRVLGGYVLASGLAVPLALVMAAWGPLRQ 95

Query: 95  VVMPLAVAVNAVPTVAYAPLFLIWFGLGAASKIALVALAVGFTMLVNALHGLKQADAAAV 154
            ++P+   +  +P +A+ PL ++WFGLG A    + A+A  F + +NA  G        +
Sbjct: 96  SLLPVVSLLRPIPPIAWIPLAILWFGLGDAPSFFITAIAAFFPIFLNAFAGGLAVGGRYL 155

Query: 155 NLMRSFGAGPLKIVWRLRLPVAMPSVVTALRIGVPRSMIVAIVGEMLGAYAGLGRMIYES 214
           +  R  GA  L ++  +RLP A+P + T LRIG+ +S +  +  E++ A +GLG MI   
Sbjct: 156 DAARCLGATRLALLLEVRLPAALPMIATGLRIGLGQSWMAVVTAELIAAQSGLGYMI--- 212

Query: 215 TQQVDLLSVWSA-VLIASVASMVFYGLLVW 243
             Q + L++ +A VL+  V       L+ W
Sbjct: 213 --QANRLTLQTAHVLVGMVTIGTLGALMTW 240