Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  100 bits (249), Expect = 3e-26
 Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 13/245 (5%)

Query: 14  LAFIGLALVWELYVHAFAPSPRYLPALSAIAQD------AWSVWPQLVRGFGRTLLETVL 67
           LA +GL   WE          R+ P  S+I         +  +W  L+    R  L    
Sbjct: 19  LALLGL---WEAAARMGLVDARFFPPPSSIVHTFGALVASGELWTNLLASLRRLFL---- 71

Query: 68  GFALGAVFGCFCGTVFTYSRWMERSVFPLFVVSQTVPVVAFGALIVIWFGNSLLAKVMTA 127
           G  LG V   F G     S+ +  ++ PL   +  +P  A   L+++ FG   ++KV+  
Sbjct: 72  GMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKVVMV 131

Query: 128 FFLTFFPVTVNTLRGLKSCDPQRIALMKSFGANRLVMFFKLAVPSALPQIMVGLRVAIGL 187
               F+P+ +NT+ G+ + D   + +  ++ A+R  +F  +A+P ALP IM G+++A+G+
Sbjct: 132 ALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAMGM 191

Query: 188 SLIGSVVGEWFGETVGLGVMLMEAMNADLVVRLWVVMFACGLMGALLYGLLTFVERRLVW 247
            LI   + E    + G+G M+  A     V  ++V +    L+G +   +L  +ER L+ 
Sbjct: 192 GLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERMLIP 251

Query: 248 WRSES 252
           W++++
Sbjct: 252 WKAKA 256