Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 5e-28
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 14/217 (6%)

Query: 19  LALVWELYVHAFAPSPRYLPALSAIAQD------AWSVWPQLVRGFGRTLLETVLGFALG 72
           L  +W+L V A   S R LPA SA+         +  +W  L     R  L  V+G ++G
Sbjct: 22  LLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGWRAGLGFVIGGSIG 81

Query: 73  AVFGCFCGTVFTYSRWMERSVFPLFVVSQTVPVVAFGALIVIWFGNSLLAKVMTAFFLTF 132
            V G   G     S W ER +     + + VP +A   L+++WFG    AK+      T 
Sbjct: 82  LVLGFITGL----SNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLVALGTL 137

Query: 133 FPVTVNTLRGLKSCDPQRIALMKSFGANRLVMFFKLAVPSALPQIMVGLRVAIGLSLIGS 192
           FP+ +NT  G+++ DP  + + +S+G +   +F ++ +P ALP I+VG+R A+G   +  
Sbjct: 138 FPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGFMWLTL 197

Query: 193 VVGEWFGETVGLGVMLMEA---MNADLVVRLWVVMFA 226
           +V E      G+G + M A   +  D+VV L +V++A
Sbjct: 198 IVAETISANAGIGYLAMNAREFLQTDVVV-LAIVLYA 233