Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 99.4 bits (246), Expect = 7e-26
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 2/198 (1%)

Query: 36  YLPALSAIAQDAWSVWPQ--LVRGFGRTLLETVLGFALGAVFGCFCGTVFTYSRWMERSV 93
           Y+P   A+   AW +     L+   G +L     G+A  A+ G   G +   S+W E ++
Sbjct: 39  YVPTPKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTL 98

Query: 94  FPLFVVSQTVPVVAFGALIVIWFGNSLLAKVMTAFFLTFFPVTVNTLRGLKSCDPQRIAL 153
            P   V + +P VA+  L ++ F +S L+ V   F    FP+ +NT+ G+++ DP+ +A 
Sbjct: 99  LPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVAS 158

Query: 154 MKSFGANRLVMFFKLAVPSALPQIMVGLRVAIGLSLIGSVVGEWFGETVGLGVMLMEAMN 213
            +S GA R  +  ++ +P ALP I+ GL + +G S    V  E      G+G    E+  
Sbjct: 159 ARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYT 218

Query: 214 ADLVVRLWVVMFACGLMG 231
                 + V M   G++G
Sbjct: 219 LQNYPDIVVGMLLIGVLG 236