Pairwise Alignments

Query, 335 a.a., Pyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 334 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 2e-27
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 13/320 (4%)

Query: 7   RILAAVAASMALLAGMP----ASAAEKVSVRLKWLAQAQFAGFYVAKAKGFYDQAGLDLT 62
           ++L+A  A+  L+A       A AA+ +S+ L W   A  A  Y AKAKG+Y +AG+DL+
Sbjct: 3   KLLSAAGATALLMASATGVSTAFAADAMSLMLNWTPTADHAPLYYAKAKGWYSEAGIDLS 62

Query: 63  INPGGPNLNVETLVASGNDTFGLAGGTETVLLAREKGLPLVCIGVTVQNTPFTYVTYKDS 122
           I  G  +      V +G  T G++    T + A+ KG  +  + V   N+P  +   K S
Sbjct: 63  IEAGKGSAVSAQRVGTGGSTLGIS-DLPTTIQAKGKGADVKAVMVIYANSPQGFYWLKSS 121

Query: 123 GITKVKDFAGKKVATWFTGTQYTLYSMLA-SAGVKQSDLTIVPQS--GSMAPFVEKQFDV 179
           GI   KDFAG+K+          ++   A  AG+  + +T V  S    +A    K  D+
Sbjct: 122 GINGPKDFAGRKIGNPPGDAARLMWPAFAKKAGLDPASVTFVNVSPQAKVAALKSKSVDI 181

Query: 180 AAATYYNELNTLKEQGLGDKLTLIKPDDYGVVVQQDTVLVSEKYRNEKPQQVQAFMNATI 239
             + +YNE + LK +  G  L      D GV V  ++++V+  Y  + P QV+ F+  T 
Sbjct: 182 -ISDFYNE-HDLKAREFGADLGFQAWRDAGVNVYGNSLIVNGPYLAKNPAQVKKFVAVTQ 239

Query: 240 KGWKYALQNKKEAIDIVMAAAPSLNRAHQEAMLDEFEKLVKAGKGTTDGILAID---LPT 296
           + ++  +++ +  +  + A+   L+  +Q    +  ++L++    T   + A D   + T
Sbjct: 240 RAYEACVKDFEPCLQALTASVSGLSPDNQRDQWNRIKQLMRDDTTTKVALGAFDGQRVKT 299

Query: 297 VEKMQTQLVGYKALKAPADL 316
             ++ + L+G      PA L
Sbjct: 300 DYELVSSLIGIDKPYDPATL 319