Pairwise Alignments

Query, 863 a.a., General secretion pathway protein D from Variovorax sp. SCN45

Subject, 764 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

 Score =  756 bits (1951), Expect = 0.0
 Identities = 396/691 (57%), Positives = 506/691 (73%), Gaps = 30/691 (4%)

Query: 39  DDKVVLNFVDADITSVVSALARFLGRNFLFDPRVKGQITLVSEGEVPAATAYGMLSTALR 98
           D  V LNFVDADI +VV AL+R  G+ FL DPRVKG +TLVSEG+VPA  AY ML  ALR
Sbjct: 87  DQPVQLNFVDADIQAVVRALSRATGQQFLVDPRVKGNLTLVSEGQVPAHQAYDMLLAALR 146

Query: 99  MRGFAIVDVGEVSRVVPVADAKLQGGSVNTRNPGGGLATRTFRLNYENAEAMLPVLKPLI 158
           M+GF++VDVG V++VVP ADAKL GG + T     G+ TRTFRL YENA  ++PVL+P++
Sbjct: 147 MQGFSVVDVGGVAQVVPEADAKLLGGPIYTAG-SSGMQTRTFRLQYENAVNLIPVLRPIV 205

Query: 159 AAENSINAYPANNTLVVTDYIDNLERLARIIESIDTPTSLDAEVVKLRNGVAVDIAGLAT 218
           +  N INAYP NN++V+TDY +NL R+A+II  IDTP+++D +VV+++NG+AVDIA + +
Sbjct: 206 SPNNPINAYPGNNSIVITDYAENLARVAQIINGIDTPSAIDTDVVRVQNGIAVDIAAMVS 265

Query: 219 ELLEGSGEKGRRDIVVLADPRSNSVVIRSSSPGRTTLARELIAKLENAQSDPGNLHVVYL 278
           ELLE  G    + I V+ DPRSNS++IRS SP RT LAR LI KL+NAQS+P N+HVVYL
Sbjct: 266 ELLETQGADQTQKINVIGDPRSNSIIIRSGSPERTELARNLIYKLDNAQSNPSNMHVVYL 325

Query: 279 RNAQSVHLAGVLRGLLTGESPDASGTGSGSVRAALGAGGMLGGAGAANGTSGGAANASSA 338
           RNAQ+  LA  LRGLLTGES       SG    A G    +GG G     +  A N+S  
Sbjct: 326 RNAQAGKLAQSLRGLLTGESD------SGVSDDARGKLSAMGGNGKNTEGTSNAQNSSGT 379

Query: 339 NRGSTGGTGTGVSTMPSGGLRGVAGGASAGGTGTQAGTSGNSNG--AAFSAGGVTVQADA 396
             GS   +G G ST                  G+  GTSG S     +FSAGGVT+QADA
Sbjct: 380 PTGSGVQSGYGQST------------------GSTTGTSGTSQDQDTSFSAGGVTIQADA 421

Query: 397 TTNTLIIAAPEPMYRSLRRVIDTLDQRRAQVLVESLIVEVTERDASELGIQWMAGGGNGR 456
           TTNTL+I+AP+P+YR+LR VID LDQRRAQV++ESLIVEV E DA+E G+QW AG   G+
Sbjct: 422 TTNTLLISAPDPLYRNLREVIDMLDQRRAQVVIESLIVEVGEDDATEFGVQWQAGNLGGK 481

Query: 457 GVRAGTNFGGATLN--PNARNTIEAMPRGLNIGIVDGTVNLPGVGEILNLKMLARALQAK 514
           G   G N GG+ +N  P ++ +I+ +P+GLN+G+VDGTV++PG+G++L+LK+LARAL++K
Sbjct: 482 GGFGGVNLGGSGVNSTPTSKTSIDVLPKGLNVGLVDGTVDIPGIGKVLDLKVLARALKSK 541

Query: 515 DGANILSTPNILTLDNEAASIMVGKTVPFVSGQYITNGN-SSTNPFQTIQREDIGLKLNI 573
            G N+LSTPN+LTLDNEAASI VG+T+PFV+G Y+T G  +S NPFQT+QRE++GLKLN+
Sbjct: 542 GGTNVLSTPNLLTLDNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNV 601

Query: 574 RPQISEGGTVKLDIYQEVSTIDTQASDISGIVTNKRALDTSILVDDGQIMVLGGLMEDSV 633
           RPQISEGGTVKLDIYQEVST+D +AS  +G VTNKRA+DTSIL+DDGQIMVLGGL++D  
Sbjct: 602 RPQISEGGTVKLDIYQEVSTVDERASVTAGTVTNKRAIDTSILLDDGQIMVLGGLLQDGY 661

Query: 634 ANGTEAVPGLGALPVVGNLFRYDKRQRVKTNLMVFLRPYVIRDANAGRGLTLDRYNFMRA 693
           +   +AVP L  +P +G LFR +KR   KTNLMVFLRPY+IRD+ AGR +TL+RY FMR 
Sbjct: 662 SQSNDAVPWLSDIPGLGALFRNEKRSVSKTNLMVFLRPYIIRDSGAGRSITLNRYEFMRR 721

Query: 694 QQGRARPVPHGLLPDVGGPALPPADLPVSGR 724
            QG  +P     +PDV  P LP  +  + G+
Sbjct: 722 AQGGLQPEHSWAMPDVQAPQLPSVEKAIPGQ 752