Pairwise Alignments

Query, 863 a.a., General secretion pathway protein D from Variovorax sp. SCN45

Subject, 734 a.a., General secretion pathway protein D from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  527 bits (1357), Expect = e-153
 Identities = 322/750 (42%), Positives = 433/750 (57%), Gaps = 79/750 (10%)

Query: 34  ARAGKDDKVVLNFVDADITSVVSALARFLGRNFLFDPRVKGQITLVSEGEVPAATAYGML 93
           A A  ++ V LNFV A+I +V   +A   GRN + DPRVKG + LV+E  V    A    
Sbjct: 40  APAAANEPVTLNFVAAEIEAVARTMATITGRNVVVDPRVKGTVNLVTERPVTPTAALNQF 99

Query: 94  STALRMRGFAIVDVGEVSRVVPVADAKLQG-----GSVNTRNPGGGLATRTFRLNYENAE 148
           +  LR++GF++VD G + ++VP ADAKLQG     GSV+       + T+ FRLN+E+A 
Sbjct: 100 AAVLRLQGFSLVDTGGLYKIVPEADAKLQGNVVSAGSVSALPASNTVVTQIFRLNHESAN 159

Query: 149 AMLPVLKPLIAAENSINAYPANNTLVVTDYIDNLERLARIIESIDTPTSLDAEVVKLRNG 208
            ++PVL+PLI   N+IN  P NN+LV+TDY DNL+R+ RII S+D   + D E++ L++ 
Sbjct: 160 NLVPVLRPLIGPNNTINVNPGNNSLVITDYADNLQRIGRIIASLDVAGATDVEIIPLQHA 219

Query: 209 VAVDIAGLATELLEGSGEKGRR-----DIVVLADPRSNSVVIRSSSPGRTTLARELIAKL 263
           VA D+A L T L++ S   G +        ++A+PRSNS+V+R+++P R  L R L+A+L
Sbjct: 220 VAADMAALVTRLIDPSTAGGAQADQSYKTTLVAEPRSNSLVLRAANPARLALVRSLVARL 279

Query: 264 ENAQSDP--GNLHVVYLRNAQSVHLAGVLRGLLTGESPDASGTGSGSVRAALGAGGMLGG 321
           +   SD   GN+HVVYL+NA +  LA  LR  L GES                +GG+ G 
Sbjct: 280 DQPSSDKLSGNIHVVYLKNADAASLATTLRAALAGES----------------SGGLSGS 323

Query: 322 AGAANGTSGGAANASSANRGSTGGTGTGVSTMPSGGLRGVAGGASAGGTGTQAGTSGNSN 381
            G      GG++  S  NR +   TGT                ASA    + A  + +  
Sbjct: 324 GGL-----GGSSATSPLNRAALTPTGT----------------ASANNNPSTAAVAAS-- 360

Query: 382 GAAFSAGGVTVQADATTNTLIIAAPEPMYRSLRRVIDTLDQRRAQVLVESLIVEVTERDA 441
            A+ S GG  +QAD  TN+LII APEP YR LR VID LD RRAQV VESLI EV    A
Sbjct: 361 -ASPSTGG-QIQADPATNSLIITAPEPQYRQLRAVIDQLDSRRAQVYVESLIAEVNAEKA 418

Query: 442 SELGIQWMAG-GGNGRGVRA--GTNFG--GATLNPNARNTIEAMPRGLNIGIVDGTVNLP 496
           +E GIQW    G +G  V    GTNFG  G  +   A+      P G+N+G+   T  + 
Sbjct: 419 AEFGIQWQGALGSSGDRVIGLLGTNFGTGGRNILELAQGNATPSP-GMNLGLARRTNGVY 477

Query: 497 GVGEILNLKMLARALQAKDGANILSTPNILTLDNEAASIMVGKTVPFVSGQYITNG---- 552
            +G       LAR LQ     N+LSTPN+LTLDNE A I++G+ VPFV+GQ+   G    
Sbjct: 478 VLG------FLARFLQENGEGNVLSTPNLLTLDNEEAKIVIGQNVPFVTGQFTNTGSGGN 531

Query: 553 NSSTNPFQTIQREDIGLKLNIRPQISEGGTVKLDIYQEVSTI-DTQASDISGIVTNKRAL 611
           N S NPFQTI+R+D+GL L ++PQISE GT+K+ IYQEVS +  +  +  +G++TNKR +
Sbjct: 532 NGSVNPFQTIERKDVGLTLRVKPQISENGTIKMTIYQEVSNVVPSSVNSTTGLITNKRTI 591

Query: 612 DTSILVDDGQIMVLGGLMEDSVANGTEAVPGLGALPVVGNLFRYDKRQRVKTNLMVFLRP 671
           ++++LV+DG ++VLGGL++D  A   E VPGLG +P+ GNLFR + R R KTNLMVFLRP
Sbjct: 592 ESTVLVEDGAVVVLGGLLQDEYAGNQEKVPGLGDVPIFGNLFRSETRSRKKTNLMVFLRP 651

Query: 672 YVIRDANAGRGLTLDRYNFMRAQQGRARPVPHGLLPDVGGPALPPADLPVSGRAPEVDLR 731
            V+RD      L LDRY  MR+ Q  A+P    +L     P +PP   P   RAP     
Sbjct: 652 VVMRDGRETSSLALDRYELMRSVQKDAQPRQSSVLGVNEAPVMPPQLPP---RAPS---- 704

Query: 732 PQNWEHTREQPPPPTTTASAVRQQPAEAAP 761
           P      R    P   TA  V   P   AP
Sbjct: 705 PDGTAPVRSLADP--QTAPPVNPAPQNTAP 732