Pairwise Alignments

Query, 863 a.a., General secretion pathway protein D from Variovorax sp. SCN45

Subject, 641 a.a., type II secretion system protein D from Enterobacter asburiae PDN3

 Score =  210 bits (534), Expect = 2e-58
 Identities = 190/698 (27%), Positives = 310/698 (44%), Gaps = 98/698 (14%)

Query: 45  NFVDADITSVVSALARFLGRNFLFDPRVKGQITLVSEGEVPAATAYGMLSTALRMRGFAI 104
           +F + D+   +  + R L +  L DP V+G +++ +   +     Y    + L + G ++
Sbjct: 29  SFKNTDVREFIDTVGRNLNKTILVDPSVQGTVSVRTYNVLTEDEYYQFFLSVLDLYGLSV 88

Query: 105 VDVGE-VSRVVPVADAKLQGGSVNTRNPGGGLATRTFRLNYENAEAMLPVLKPLIAAENS 163
           + +   + +VV  + A++ G                                P+  ++N 
Sbjct: 89  IPMDNGMVKVVRSSVARMSGA-------------------------------PIADSKN- 116

Query: 164 INAYPANNTLVVTDYIDNLERLARIIESIDTPTSLDAEVVKLRNGVAVDIAGLATELLEG 223
               P     V+T                         VV++ N    ++A L  +L + 
Sbjct: 117 ----PGKGDEVIT------------------------RVVRMENVPVRELAPLLRQLNDA 148

Query: 224 SGEKGRRDIVVLADPRSNSVVIRSSSPGRTTLARELIAKLENA-QSDPGNLHVVYLRNAQ 282
           SG       VV  +P SN +++     G+ ++   L+  ++   QS      +V LR A 
Sbjct: 149 SGIGN----VVHFEP-SNVLLLT----GKASVVNRLVDLVQRVDQSGVQRREIVPLRFAS 199

Query: 283 SVHLAGVLRGLLTGESPDASGTGSGSVRAALGAGGMLGGAGAANGTSGGAANASSANRGS 342
           +  L+ +L  L   E    +     +   A      L  +G+ +         S  +R  
Sbjct: 200 AKELSDMLNNLNNEEQKGQNAPQLATKVVADDETNSLVISGSPDARQRTRTLISQLDREQ 259

Query: 343 TGGTGTGVSTMPSGGLRGVAGGASAGGTGTQAGTSGNSNGAAFSAGGVTVQADATTNTLI 402
                T V  +       V    +  G   +    G  + AA  AG + + AD +TN+L+
Sbjct: 260 NNEGNTRVFYLKYANASKVVPVLTGIGEQLKDKAGGGKSKAAPIAGDLNISADESTNSLV 319

Query: 403 IAAPEPMYRSLRRVIDTLDQRRAQVLVESLIVEVTERDASELGIQWMAGGGNGRGVRAGT 462
           I A   +  SL +VID LD RR QVLVE++I EV + +  +LG+QW +  G   GV+ G+
Sbjct: 320 ITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGNGLDLGVQWTSKHG---GVQFGS 376

Query: 463 NFGGATLNPNARNTIEAMPRGLNIGIVDGTVNLPGVGEILNLKMLARALQAKDGANILST 522
              G  ++   ++ +     GL  G  +G           +   L  AL      +ILST
Sbjct: 377 T--GLPISQIKKSKVIGSYTGLATGFFNG-----------DFGALMTALSTNGKNDILST 423

Query: 523 PNILTLDNEAASIMVGKTVPFVSGQYITNGNSSTNPFQTIQREDIGLKLNIRPQISEGGT 582
           P+++TLDN+ AS  VG+ VP +SG   T+G+   N F +++R+ +G KL I PQI++G  
Sbjct: 424 PSVVTLDNKEASFNVGQDVPVLSGSQTTSGD---NVFNSVERKTVGTKLKIVPQINDGDM 480

Query: 583 VKLDIYQEVSTID-TQASDIS-GIVTNKRALDTSILVDDGQIMVLGGLMEDSVANGTEAV 640
           + L I QEVS++D T  +D S G   N R ++  ++V  GQ +VLGGLME+        V
Sbjct: 481 IHLKIEQEVSSVDNTSTADASLGPTFNTRTINNEVMVHSGQTVVLGGLMENVTKQSVSKV 540

Query: 641 PGLGALPVVGNLFRYDKRQRVKTNLMVFLRPYVIRDANAGRGLTLDRYNFMRA-QQGRAR 699
           P LG +PVVG LFRY  +   K NLMVF+   V+RD +     + ++Y  ++A QQ R  
Sbjct: 541 PLLGDIPVVGQLFRYTSQDSAKRNLMVFIHTTVLRDDDNYGAASKEKYEQIQARQQQRME 600

Query: 700 PVPHGLLPDVGGPALP--PAD---LPVSGRAPEVDLRP 732
               G++ +   P LP  P+     PVS  AP     P
Sbjct: 601 EHKLGIVENADSPMLPAYPSQSRAAPVSASAPVSSRNP 638