Pairwise Alignments

Query, 305 a.a., putative membrane protein from Variovorax sp. SCN45

Subject, 315 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 11/287 (3%)

Query: 14  VLLAGALWGGGALVAQFLIDGG-IAPQSLSLARFAL-GLPLLWWLHWRGSARPGGHWADL 71
           VL+A  LWG   + AQ++++   ++ Q L++ R    GL L+ +    G       ++ L
Sbjct: 26  VLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKI----FSIL 81

Query: 72  AGR-ERFQVLATGAAMALNVSCWFV-GISHLGAALPTVISICCAPLIVALVSVLRGYERF 129
             R +   +L      AL V   F+  I    AA  TV+      +IVA  ++ R   R 
Sbjct: 82  KNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARR-TRP 140

Query: 130 GARLLAGLLLALAGVFLLVMPADGWGPLAPGHAAGVAWSLASAFCYAMVVLGNARMPARV 189
           G  +L  +L +L G FLLV    G        +A + W +ASAF  A      +R+ A+ 
Sbjct: 141 GILVLTAILTSLIGTFLLV--THGNPTSLSISSAALFWGIASAFAAAFYTTWPSRLIAQY 198

Query: 190 PAVTASAWGMTVAALCMLAVAWPRGITWPAGGAQWLGVGYTGVVTTSVAYLAFAWGARRL 249
             +    W M+   L +L      G  +   G+  L   Y  V+ TS+ +  +  GA+ +
Sbjct: 199 GTLPVVGWSMSFGGLILLPFYAKEGTHFAVSGSLILAFFYLVVIGTSLTFSLYLKGAQLI 258

Query: 250 SPTSAVIGTLIEPLVAALLAAALLAEPMAPRQWAGALLLAGAMLLLA 296
               A I +  EPL +ALL+  LL        W G LL+  +++L++
Sbjct: 259 GGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILIS 305