Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  138 bits (348), Expect = 1e-36
 Identities = 122/433 (28%), Positives = 197/433 (45%), Gaps = 23/433 (5%)

Query: 222 TDLLSGLPNRRALSEYLEILLKRDQTQHV-LLTFEVGNLKEMVRTLGHDWTDKFWGHLAR 280
           TD L+ L NR A    L+    RD    + LL  ++ N K +  +LGH   DK    LAR
Sbjct: 471 TDNLTNLGNRPAFIRNLDERFARDSDSPISLLLVDIDNFKRINDSLGHQTGDKLLISLAR 530

Query: 281 ELMRQESLKLTSNGKSKCFQLSDLALAFVVKETSVKQIENSQLMPRLYADI---TEHLQV 337
            L       L++ G    F  ++ A+     +    Q   SQL+  L   +    + + V
Sbjct: 531 RLRNS----LSTGGSLARFASNEFAVLLDDTDLESGQQVASQLLATLDKPMFVDNQLISV 586

Query: 338 AGGPYSSAQLRCGITNVRMAGETNSSSVLRNISLALQSSN----QQIRYFHDSFSAQADR 393
            G    S  L C   + R     +  +++RN  LAL  +      Q++ F ++ +A+A  
Sbjct: 587 TG----SVGLACAPLHGR-----DPQTLMRNAGLALHKAKANGKHQVQVFTEALNAEASY 637

Query: 394 DADVHELMIGWIRTVNPPMSYQPKFDLETRQICGAEALLRANSAEGISLSPLYVLDVATR 453
              V   +   +      + YQPK  L + ++ G EALLR N  E   + P   + VA  
Sbjct: 638 KLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALLRWNHPEKGMIRPDQFISVAEE 697

Query: 454 YQLLLKLEWCIVEMVIREIANCMASGF-HMPLSVNISAASITVPGLGERILDRLSRYSVP 512
             L++ +   I     R      ASG  ++ +++N+S    + P L   I   L    +P
Sbjct: 698 TGLIIPIGKWIARQACRMSKQLSASGMGNLQVAINLSPKQFSDPDLVASIASILKEEQLP 757

Query: 513 FELLSIEITESGHVPDMDTVRENVHRLHSAGVGLSLDDFGAGYSTLTTLAKIPFNEVKID 572
             LL +E+TE   +   +  R  + +L S G+ L++DDFG GYS+L+ L K P + +KID
Sbjct: 758 ANLLELELTEGLLLEATEDTRLQLDQLKSLGLTLAMDDFGTGYSSLSYLKKFPIDIIKID 817

Query: 573 YAMVSMIEQPRMNKAIGLA-LESATRYGATLVAEGVETEAQLAILIDMGIKFGQGFLLSK 631
            + +  I   + +  I  A +  A      +VAEG+ET  QLA L       GQG+L  +
Sbjct: 818 RSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVAEGIETAEQLAFLRRHRCDVGQGYLFDR 877

Query: 632 AVPMDDLIELARR 644
            +P  +L+ + +R
Sbjct: 878 PIPGAELLAMLKR 890