Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 3e-34
 Identities = 132/476 (27%), Positives = 214/476 (44%), Gaps = 33/476 (6%)

Query: 181 VTTLQIFGFSTSLFILGSVIA-----LLRSDALVRESYFQRMQMYRTDLLSGLPNRRALS 235
           +TTL +   +    +L + +      L RS  L  +   +  Q+   D L+ LPNR  L+
Sbjct: 222 ITTLAVLAVALLTSVLDARLEARTAELARSLTLANQ---ELTQLALHDTLTDLPNRTLLA 278

Query: 236 EYLEILLKRDQTQ---HVLLTFEVGNLKEMVRTLGHDWTDKFWGHLARELMRQESLK--L 290
           + +E  + +   Q     L+  ++   K +    GH   D     +A  L      +  L
Sbjct: 279 DRIEQAIAKVAEQGGCFALMFIDLDGFKPVNDAFGHHIGDLLLKAVAARLRGHLHSQDTL 338

Query: 291 TSNGKSKCFQLSDLALAFVVKETSVKQIENSQLMPRLYADITEHLQVAGGPYSSAQLRCG 350
              G  +   L +L       + +VKQ+    L+ R +      LQ+      SA L  G
Sbjct: 339 ARIGGDEFVLLVELQEPNDAMDVAVKQVN---LVSRPFRVAEHDLQL------SASL--G 387

Query: 351 ITNVRMAGETNSSSVLRNISLALQSSNQQIRYFHDSFSAQADRDADVHELMIGWIRTVNP 410
           I      G+ +   +LRN   A+  +    +  +  F    + +A     ++  +R    
Sbjct: 388 IVLYPGNGQ-DQHELLRNADAAMYHAKSAGKNGYSFFDVSMNSNARQQLQLLQDLRLALE 446

Query: 411 P----MSYQPKFDLETRQICGAEALLRANSAEGISLSPLYVLDVATRYQLLLKL-EWCIV 465
                + YQPKFD +  Q  GAEALLR    +   L P   + +A +  L++ + EW + 
Sbjct: 447 QRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQGLLLPDRFIGLAEKTGLIIPIGEWVLT 506

Query: 466 EMVIREIANCMASGFH-MPLSVNISAASITVPGLGERILDRLSRYSVPFELLSIEITESG 524
           E   R++   +  G H   ++VN+SA      GL + +   L +  +P   L++EITE+ 
Sbjct: 507 E-ACRQMRQWLDQGHHGWRMAVNLSAIQFCHAGLVDSVARALQQNGLPANCLTLEITETT 565

Query: 525 HVPDMDTVRENVHRLHSAGVGLSLDDFGAGYSTLTTLAKIPFNEVKIDYAMVSMIEQPRM 584
            + D D     + RL   GV LS+DDFG GYS+L  L ++P NE+KID   V  +EQ   
Sbjct: 566 AMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDLEQDSD 625

Query: 585 NKAIGLALES-ATRYGATLVAEGVETEAQLAILIDMGIKFGQGFLLSKAVPMDDLI 639
           + AI  A+ +     G  +VAEGVET+ Q   L  +G    QG+LL + VP +  +
Sbjct: 626 DAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQGYLLGQPVPAEQFM 681