Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 5e-36
 Identities = 118/428 (27%), Positives = 198/428 (46%), Gaps = 23/428 (5%)

Query: 222 TDLLSGLPNRRALSEYLEILLKRDQTQH---VLLTFEVGNLKEMVRTLGHDWTDKFWGHL 278
           TD LSGL NRR   E    +L R + +     +L  ++   K +  +LGH   D     +
Sbjct: 323 TDHLSGLHNRRQFVEVASQVLTRQRGKRRLMAILFIDMDRFKSINDSLGHKIGDLLLQAV 382

Query: 279 ARELMRQESLKLTSNGKSKCFQLSDLALAFVVKETSVKQIEN--SQLMPRLYADITEHLQ 336
           A  + R     L   G        D  +  +  E S +QI     +L+ +L A       
Sbjct: 383 AGRIQR-----LLEPGDEASRFGGDEFVVLLAGERSEEQINAWVHELVQKLSATYA---- 433

Query: 337 VAGGPYSSAQLRCGITNVRMAGETNSSSVLRNISLALQSSNQ----QIRYFHDSFSAQAD 392
              G   +     G++     G+ +  S++R+   A+ S+ Q    Q R+F  S +  AD
Sbjct: 434 -LDGQEVNTSPSVGVSICPRDGQ-DIDSLIRSADAAMYSAKQAGRAQFRFFDPSLNL-AD 490

Query: 393 RDADVHELMIGWIRTVNP-PMSYQPKFDLETRQICGAEALLRANSAEGISLSPLYVLDVA 451
             A   E   G         + YQP+  L+T Q+ G EAL+R +  E   L P   +D+A
Sbjct: 491 IQAFTLEQAFGSALAERQFVLHYQPQMRLDTHQVQGYEALVRWDHPEFGLLYPDRFIDLA 550

Query: 452 TRYQLLLKLEWCIVEMVIREIANCMASGFHMPLSVNISAASITVPGLGERILDRLSRYSV 511
            R   +++L W ++++    +++  A G    L+VN+SA  +      +R+L +L  + +
Sbjct: 551 ERSGFIVELGWEVLQLACEALSSWDAQGRKTRLAVNVSALQLRQADFADRLLSKLQHHGI 610

Query: 512 PFELLSIEITESGHVPDMDTVRENVHRLHSAGVGLSLDDFGAGYSTLTTLAKIPFNEVKI 571
             + L +EITE+  +    T   ++H L  AG+G+SLDDFG GY+    L  +P +++KI
Sbjct: 611 APQQLELEITETTILDPEGTAVAHLHTLRGAGLGISLDDFGRGYAGFAHLHSLPLSKLKI 670

Query: 572 DYAMVSMIEQPRMNKAI-GLALESATRYGATLVAEGVETEAQLAILIDMGIKFGQGFLLS 630
           D ++++ +     +  I    +  A R G  +VAEGVET  Q+  L   G    QG+  S
Sbjct: 671 DRSLIAALSNSHDDSPIVSSTIILAKRLGLEVVAEGVETREQVVYLKLAGCDIAQGYHFS 730

Query: 631 KAVPMDDL 638
           + + +  L
Sbjct: 731 RPLSLAQL 738