Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (297), Expect = 6e-31
 Identities = 116/437 (26%), Positives = 200/437 (45%), Gaps = 32/437 (7%)

Query: 218 QMYRTDLLSGLPNRRALSEYL--EILLKRDQTQHVLLTF-EVGNLKEMVRTLGHDWTDKF 274
           Q+   DLL+GLPNRR L + +   I L   Q + + L F ++ N K +  TLGH   D  
Sbjct: 233 QLANRDLLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDAL 292

Query: 275 WGHLA---RELMRQESLKLTSNGKSKCFQLSDLALAFVVKETSVKQIENSQLMPRLYADI 331
              +A    ++MR         G      +  L  A      + K IE   +  +L +++
Sbjct: 293 LRIIADRIHDIMRGMDTVARWGGDEFVIVVESLNSAGEAASVAEKLIETIGVPVQLGSNL 352

Query: 332 TEHLQVAGGPYSSAQLRCGIT-NVRMAGETNS--SSVLRNISLALQSSNQQIR----YFH 384
                          LR G++  + M  +  +  +++++N  +AL  +  + R    +F 
Sbjct: 353 ---------------LRVGVSVGISMYPQDGADITTLIKNADMALFEAKGRGRNTFHFFD 397

Query: 385 DSFSAQADRDADVHELMIGWIRTVNPPMSYQPKFDLETRQICGAEALLR-ANSAEGISLS 443
            + +A+A R  D+   +   I      + YQPK    +  + G EAL+R     EG+ + 
Sbjct: 398 QAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGALAGVEALVRWRRPGEGL-VQ 456

Query: 444 PLYVLDVATRYQLLLKLEWCIVEMVIREIANCMASGF-HMPLSVNISAASITVPGLGERI 502
           P   + +A    L++ +   ++    R+I +  A GF  + ++VN+S          + I
Sbjct: 457 PDEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVAVAVNLSPRHFLHEKDVDGI 516

Query: 503 LDRLSRYSVPFELLSIEITESGHVPDMDTVRENVHRLHSAGVGLSLDDFGAGYSTLTTLA 562
              + +  V  +L+ +E+TES  + + + V   ++RL   G G+++DDFG+GYS+L+ L 
Sbjct: 517 FRIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRGFGIAIDDFGSGYSSLSYLR 576

Query: 563 KIPFNEVKIDYAMVSMIEQPRMN-KAIGLALESATRYGATLVAEGVETEAQLAILIDMGI 621
           ++P   +KID A V  IE    N + I   +  A   G  L+AEGVE   Q   L     
Sbjct: 577 RLPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGLIAEGVENRHQFEFLRHADC 636

Query: 622 KFGQGFLLSKAVPMDDL 638
              QG+  S+ +P  DL
Sbjct: 637 GVVQGYYFSRPLPPADL 653