Pairwise Alignments

Query, 335 a.a., no description from Variovorax sp. SCN45

Subject, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  131 bits (329), Expect = 3e-35
 Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 36/348 (10%)

Query: 5   EVRVNEFRKL----IKPLSLGMQLGGVFFVAMSWLLADDSYKYDIRQILLLLALTMISIG 60
           E R +EF  +    +   S+ + +  VF + +S+L  D  + +     + LL   ++ + 
Sbjct: 21  EFRQHEFESMRSFCLLVFSISVLIWLVFDLIVSFL-GDQGFTWLSFLFIALLGSLIVVLH 79

Query: 61  ASWKIPFFSLFSITTVWLICL--EFVLLAAPSANRDYWMTALSIGIS-----LAVAPVFS 113
            + +   F + ++  + +I L    V+   P A R  W+    +G+S     ++V PV  
Sbjct: 80  FTRRSHHFDVLNLLFITVITLGMRLVIEGIPIALRPVWLV---LGVSTVLYAMSVLPV-- 134

Query: 114 RISEYVIVSIGVWLIFGRGSLMDAPFGGDTKWSWLLIS-AVILVGI----FLNALFARIH 168
           R   +    +  W++             D     +LIS AV L G+    +L    A++H
Sbjct: 135 RRWSFFCAMVITWVMLN--PFYHTRIEPDALEGAMLISYAVFLSGLVSYSYLQIRKAKLH 192

Query: 169 RQSILLRNKLVDLAFTDALTGIDNRRKFLSDVDKAQGSQDMNSACLLMIDIDNFKRINDE 228
             +  L   L++ A+ DALT I NRR F++  D+ Q     +   L MIDIDNFKR+ND 
Sbjct: 193 --NFYLSKVLLEQAYVDALTDIPNRRSFMAQADR-QLRMATSGQYLAMIDIDNFKRVNDR 249

Query: 229 FGHPLGDEVLQQVAQTIRQSVPDEPCGRLGGEEFGVFL----TQGGEERATKIADQLLIE 284
           FGH +GDEVL++VA  I+ S+ D+   RLGGEEF +F      QG E+R   +  ++  +
Sbjct: 250 FGHDVGDEVLKRVALHIKTSMADQAFARLGGEEFAIFFEGLDQQGAEQRVAALCQRVRED 309

Query: 285 IRELNVIGRKITASVGISRMNEKQSFSELMKNADEALYIAKSLGKDRF 332
             E       +T S+G+++++  +S +  +  AD+ALY AK  GKDRF
Sbjct: 310 AGE-----HPVTISIGLAKVDRGESLTTALVRADQALYEAKHTGKDRF 352