Pairwise Alignments

Query, 450 a.a., General secretion pathway protein E from Variovorax sp. SCN45

Subject, 559 a.a., type II secretion system protein E from Pseudomonas simiae WCS417

 Score =  322 bits (825), Expect = 2e-92
 Identities = 171/372 (45%), Positives = 246/372 (66%), Gaps = 6/372 (1%)

Query: 77  DDAPVIRMINALLAQAARDGASDIHLESFETHSVVRYRVDGTLRDVVAPRKALHAALISR 136
           +DA ++ +++ LL  A    ASDIH+E       VR+R+DG L DV      +  A++SR
Sbjct: 180 NDAHIVNIVDWLLQYAFAQRASDIHIEPCREQGRVRFRIDGLLHDVYQFPPQVTMAVVSR 239

Query: 137 IKIMSQLDIAEKRLPQDGRI-TLRVGGRPIDVRVSTVPTAHGERAVLRLLEKDAGRLRLE 195
           +K + ++++AEKR PQDGR+ T    G  +++R+ST+PTA GE+ VLR+ +        +
Sbjct: 240 LKSLGRMNVAEKRRPQDGRVKTKSPTGAEVELRLSTLPTAFGEKLVLRIFDPQVLLKGFD 299

Query: 196 RLGMAPDTLAELTRLVRQPHGIVLVTGPTGSGKTTTLYAALGQLDLSTSNILTVEDPVEY 255
           +LG++ D       + RQ HGI+LVTGPTGSGKT+TLY  L QL     N+ TVEDP+E 
Sbjct: 300 QLGLSADDQRRWQSMTRQTHGIILVTGPTGSGKTSTLYTTLRQLATREVNLCTVEDPIEM 359

Query: 256 DLPGIGQIPVHGKIGMTFGAALRAALRQDPDNIMIGEIRDLETAQIAVQSSLTGHGVLAS 315
             P   Q+ V   I +TF + +RA LRQDPD IMIGEIRD ETA++A+Q++LTGH VL++
Sbjct: 360 VEPTFNQMQVQHNIDLTFASGIRALLRQDPDIIMIGEIRDQETAEMAIQAALTGHLVLST 419

Query: 316 LHTNDAVSAVTRMTDMGIEPFLLSSSLLGVLAQRLVRCLCPACKAPQTRPDGSVVYGPVG 375
           LHTNDA SA++R+ ++GI  +L+ ++LLGV+AQRLVR LCP CK  +T  D    +  VG
Sbjct: 420 LHTNDAPSAISRLQELGIAHYLIKATLLGVMAQRLVRVLCPHCK--RTLGD---AHEAVG 474

Query: 376 CAACGHSGFKGRTGIHELFVVHDDVRRLIHEGGDEQAMRAAAAKRGMRSMREDGQRWVRE 435
           C  C  SG++GR G++E+ V+++ ++ LI  G D  A+R  A  +GM S+R  G + V  
Sbjct: 475 CGECRQSGYRGRAGVYEIMVLNEALKTLITPGADLHALRQKAIAQGMCSLRMAGVKKVEA 534

Query: 436 GITTAEEILRVT 447
           G+TT  E+LRVT
Sbjct: 535 GLTTMAEVLRVT 546