Pairwise Alignments

Query, 401 a.a., General secretion pathway protein F from Variovorax sp. SCN45

Subject, 400 a.a., Type IV fimbrial assembly protein PilC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  146 bits (368), Expect = 1e-39
 Identities = 99/393 (25%), Positives = 192/393 (48%), Gaps = 7/393 (1%)

Query: 4   FEYEAASASGELQRGTTEGESARSVRAQLRDRGLTPLDIREKAAGGGALSWLSPRLGAAD 63
           + ++  +  G+L++     ++  ++   L+ + + PL I  K  G  A  W   +  +A+
Sbjct: 7   WRWQGVNDKGQLEQDVVWADNRLALIITLQHQRIMPLRI--KRMGVNAALWKEEQ--SAE 62

Query: 64  LCWATRELASLLGARLTLEAALVATIEQAERKHVAESLSAVCDSVRAGMRLADALGERPR 123
           +     +LA+L+ A LTL   L    +Q   +     L  +   +  G+  + AL   P+
Sbjct: 63  II---HQLATLIHAGLTLSEGLELLAKQHPHRQWQALLRTLAHELEQGVPFSSALVSWPQ 119

Query: 124 DFPQIYRALVSAGEDSGDLARVMERLADYLENRDNLRGKVLTAFIYPAIVGFVSLCIVVF 183
            FP +Y+ ++  GE +G LA     LA   + +  +   V  A  YPAI+  ++  +V  
Sbjct: 120 VFPPLYQTMIRTGELTGKLAECCFELARQQKAQRQITVSVKKALRYPAIILTMAALVVFA 179

Query: 184 LLGYVVPQVIGAFAQARQELPTITRVMLAASAFVREWGWLTAGVVVAAWVAARALLRDAA 243
           +L +V+P+    +      LP +TR ++A + +   WGWL   + +   +A R + +  +
Sbjct: 180 MLHFVLPEFAAIYRSFNTPLPLLTRGIIAIAQWGSAWGWLILFLTMLVAIAHRRVKQKPS 239

Query: 244 HKLKWHGLILRMPMVGRFALGVDTARFASTLSILMDAGVPLLRALEAARQTLVNEWLKRC 303
            + +   L+LR+P++GR   G   A+  + L++   AG+P L+ LE+A  +L   +  + 
Sbjct: 240 WQAQRQRLLLRLPVMGRLIRGQKLAQIFTVLALTQSAGIPFLQGLESAIDSLGCPYWSQR 299

Query: 304 VLEATGRVKEGTPLAAALKAQKIFPSNLVHLVASGEKTGALAAMFERAALNLSRDLERRA 363
           + +    +  G P+  ALK  + F    + LV +GE +G+L  M    A + S      A
Sbjct: 300 LTQVHQEIAAGNPVWLALKNTQEFSPLCLQLVRTGEASGSLDIMLHNLARHHSETTLALA 359

Query: 364 MRLTTLLEPLMILAMGGVVMAIVLAVLMPIMEI 396
             L +LLEP +++  G ++  +V+A+ +PI  +
Sbjct: 360 DNLASLLEPALLIITGLIIGTLVVAMYLPIFHL 392