Pairwise Alignments

Query, 389 a.a., Ribosome LSU-associated GTP-binding protein HflX from Variovorax sp. SCN45

Subject, 467 a.a., ribosome biogenesis GTPase Der from Rhodanobacter sp000427505 FW510-R12

 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 21/133 (15%)

Query: 202 ISLVGYTNAGKSSLFNALVKARAYAADQLFATLDTTTRNLYLGDAR---RQVSISDTVGF 258
           ++LVG  N GKS+LFN L ++R    D L A +   TR+ + G  R   R   + DT G 
Sbjct: 5   VALVGRPNVGKSTLFNVLTRSR----DALVADMPGVTRDRHYGICRIGERPFVVVDTGGL 60

Query: 259 IRDLPHGLVDAFKATLQEAV-----DADLLLHVIDASNPHYPEQMAEVQTVLREIGADTV 313
                 G  DA      + V     +AD L+ V+DA +   P+  A +   LR  G   V
Sbjct: 61  -----SGTEDAMDVLTAKQVRLAIAEADALVFVVDARDGLLPQDDA-ILAELRRSGKPIV 114

Query: 314 AQLLVFNKLDALE 326
           A   V NK D L+
Sbjct: 115 A---VVNKTDGLD 124



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 13/196 (6%)

Query: 199 TFNISLVGYTNAGKSSLFNALVKARAYAADQLFATLDTTTRNLYLGDARRQVSISDTVGF 258
           +  +++VG  NAGKS+L N L+         +  T     R     D +R   I DT G 
Sbjct: 178 SIRVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLI-DTAGI 236

Query: 259 IRDL-PHGLVDAFKA--TLQEAVDADLLLHVIDASNPHYPEQMAEVQTVLREIGADTVAQ 315
            R       V+ F    TLQ    A +++ +IDA      E +A+    L     D    
Sbjct: 237 RRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDAR-----ENLADQDLTLIGYAIDEGRA 291

Query: 316 LLV-FNKLDALESAQHP--LHLQDEMEIDGVQVPRIFLSAKSGEGV-PLLRAELARQSGS 371
           L++  NK D ++  Q        D   +      ++ +SA  G G+  L+RA +   + +
Sbjct: 292 LVIAINKWDDMDPYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASA 351

Query: 372 VADTMSPEADAELHDA 387
             + +S +    L  A
Sbjct: 352 TRELVSSDLTKALEKA 367