Pairwise Alignments

Query, 384 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

Subject, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 24/364 (6%)

Query: 17  GVLTCAALCVDSFDNNAHAATVAATAPAPMLVRQGNRLTVPEGSPLRDRLRVATVGEQAS 76
           G LT AAL V    N  HA T+   +           +T    +    ++RV    + A+
Sbjct: 18  GGLTLAALLVA---NGLHARTLHEQS-----------VTAWTETAAIPQVRVFQPQQNAA 63

Query: 77  PHDVSLPATVEANPASTVNVLPPLTGKLAELKVRLGDTVKRGQVLATMTSPDLAQAVSDA 136
              + LPA +EA   + ++    ++G L + K  +G  VK GQ+LA + SPDL Q ++  
Sbjct: 64  GDTLRLPAHLEAWSKAPIHAR--VSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQT 121

Query: 137 QKARDALDLAQRALVRARGVNEAGSNAAKDVEAAQSAVAQQTAELRRSETRLRSLGADGS 196
             AR   + A   L +          A+  V   ++   ++T+    ++    +  AD +
Sbjct: 122 H-ARLIQEQANARLAQTTATRWQNLLASHSVSRQEAD--EKTSNAAAAKANAEAAAADYA 178

Query: 197 GAQAGQLLKIV-APISGTVTALNAAAGANLN---DATATLMTVANLDSVWVTVNVPENVV 252
              A +  K + AP +GT+TA N   G  +    D+   L  +A+   + + V VP+N  
Sbjct: 179 RLSALESYKTIRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYA 238

Query: 253 GAVAPGQNVTVSLAAFPGRRFTGKVGFVSAVLEADTRRAKARIVFANPEGLFKPNMYATA 312
             + PG    +++   PG  F  ++   S  ++  +    A+ V  NP G   P  YA A
Sbjct: 239 AVIHPGLEAELTVPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEA 298

Query: 313 VLGVPQAAQ-PQVPASALLMNNDAVSVFVEAEPWTFVRRMVELGREDGDQVRIRSGLNAG 371
            L +P       +PASAL+       V V         + + +G + G+++ I  GL   
Sbjct: 299 TLPIPADTHGVSIPASALIFRAQGTQVAVLDAHNHVHLQTIHIGLDLGERLVIDQGLKPV 358

Query: 372 ERVV 375
           +RVV
Sbjct: 359 DRVV 362