Pairwise Alignments

Query, 384 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 90/335 (26%), Positives = 141/335 (42%), Gaps = 36/335 (10%)

Query: 66  LRVATVGEQASPHDVSLPATVEANPASTVNVLPPLTGKLAELKVRLGDTVKRGQVLATMT 125
           + VA    +  P    LPA         V++   + G +  L    G  VK GQ+L  + 
Sbjct: 63  ITVAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLN 122

Query: 126 SPDLAQAVSDAQKARDALDLAQRALVRARGVNEAGSNAAKDVEAAQSAVAQQTAELRRSE 185
                    D + A     LA   L +       GS    D   ++    + +++ RR++
Sbjct: 123 D--------DQETALLGTALADLGLAKVDFGR--GSQLVGDSAISRGEFDRLSSQYRRNQ 172

Query: 186 TRLRSLGADGSGAQAGQLLKIVAPISGTVTALNAAAGANLNDATATLMTVANLDSVWVTV 245
             +  L A           +I AP SGT+       G  L   T  + T+ +  S++V  
Sbjct: 173 AVVEQLKAQKIKK------RINAPFSGTIGIRQVDIGQYLAAGTV-IATLQDTSSLYVDF 225

Query: 246 NVPENVVGAVAPGQNVTVSLAAFPGRRFTGKVGFVSAVLEADTRRAKARIVFANPEGLFK 305
           NVPE  +  ++ GQ V V +AA+PG+RF G +  ++  +E  TR    R   ANP+G   
Sbjct: 226 NVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLL 285

Query: 306 PNMYATAVLGVPQAAQPQ--VPASALLMNNDAVSVFV---------------EAEPWTFV 348
           P M+A+ ++ +P   QPQ  VP SA+       SV+V               + +P    
Sbjct: 286 PGMFASLLILLPN-PQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVA 344

Query: 349 -RRMVELGREDGDQVRIRSGLNAGERVVVRGGVLL 382
            +R V+ G      V +  GL AGE+VV  G + L
Sbjct: 345 EQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKL 379