Pairwise Alignments

Query, 330 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 296 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 21/263 (7%)

Query: 64  SSAITVMAHDMPVTFWALQALNVVVLCMIVSIWYFSQRRVAR-------GRLVQAVLAER 116
           S  +++ A+        L  LN+  L ++V +  +  R+  +        RL+Q    ER
Sbjct: 29  SLLLSLWAYHFSAALPLLVMLNLTTL-VVVGLQQWHSRKAIKFQPQELADRLLQVQENER 87

Query: 117 RRIANDLHDGVGSRLVALLASQDPKTAAAPDSLSMALQACLLELQMTVDDLDDQTSATAV 176
            R++ +LHD +G  L A     +      P+ L          L  T+  + D ++    
Sbjct: 88  HRLSRELHDDIGQLLTAAKLQSEWLKRRLPEDLQSQCTVLCNTLNETLAKVRDVSAILNP 147

Query: 177 ERLAHL------RYRLRPAFDRLGVTLAWDISDAAHDQPLPPETTMQICRVAQEALSNAL 230
            +LA L      R  L    +   V   W +        +P E  +   R+ QEA++N L
Sbjct: 148 RQLASLGLEASLRAHLLKTLENTQV--CWSLECQQRLTGIPEEMAVAAFRITQEAVTNML 205

Query: 231 RHSRATRVELHFGLQSSPRRLMLEVRDNGRGIGIGAAAGQPPERLGKGLRSMRARAEAIG 290
           RH++A  + +   LQ  P  L L + D+G+G       G   +R   G+  M  R + +G
Sbjct: 206 RHAQARNLLVR--LQRLPEGLSLFISDDGQGFSPAINPGLEGQR---GMAGMSERIDQLG 260

Query: 291 GELVVADVAPQGLCVRLLVPCEP 313
           G L V+    +G  +  L P  P
Sbjct: 261 GSLSVSSQPGKGTRIDALFPWAP 283