Pairwise Alignments

Query, 330 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 465 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 95/329 (28%), Positives = 151/329 (45%), Gaps = 58/329 (17%)

Query: 28  LLSWLWKRIPRRRV---LMWAA--------LAAAMHLTPVTAQVIRASSAI--TVMAHDM 74
           L+ + W++   R++   L +AA        +   ++L  V A    A   +  ++  + +
Sbjct: 145 LVQYKWEKPSTRKIADKLSFAAGLDKWRWMIGTGVYLDDVFAATAAAKEELRHSITWNFL 204

Query: 75  PVTFWALQA-LNVVVLCMIVSIWYFSQRRVARGRL---VQAVL----AERRRIANDLHDG 126
            V  +A+ A L V   CM++++    Q+R+A GRL   +Q V+     ER RIA +LHDG
Sbjct: 205 IVALFAVPAVLLVFATCMLLNL---RQQRLADGRLKELMQRVIDTQDEERLRIARELHDG 261

Query: 127 VGSRLVALLASQD-PKTAAAPDSLSMALQACLLELQMTVDDLDDQTSAT--AVERLAHLR 183
           +   LV +  + D  +    PD++              V+ +    SA   A++ +  + 
Sbjct: 262 ISQNLVGVRFAIDLARRKVTPDNVG------------AVEAIGKGASALTEAIKEVRRIS 309

Query: 184 YRLRP-AFDRLGVTLAWD---------------ISDAAHDQPLPPETTMQICRVAQEALS 227
           + LRP   D LG+T A +               +   A    L PE  + + RVAQEAL+
Sbjct: 310 HDLRPRVLDDLGLTAALEALISSFSERTGIAATLESVAFKHMLVPEARVALYRVAQEALT 369

Query: 228 NALRHSRATRVELHFGLQSSPRRLMLEVRDNGRGIGIGAAAGQPPERLGKGLRSMRARAE 287
           N  RHS ATRV + F   S   R+ + V DNGRG        + P   G GLR+M+ R  
Sbjct: 370 NIERHSDATRVTIRF--SSRDERVQMVVSDNGRGFPATRTENEMPADKGLGLRNMQERMT 427

Query: 288 AIGGELVVADVAPQGLCVRLLVPCEPGKE 316
             GG L V   A +G  +R ++P    K+
Sbjct: 428 HFGGRLDVESSA-KGTVLRAVLPMTAMKD 455