Pairwise Alignments

Query, 629 a.a., phage integrase family protein from Variovorax sp. OAS795

Subject, 298 a.a., site-specific tyrosine recombinase XerC (NCBI) from Escherichia coli BW25113

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 44/253 (17%)

Query: 368 LAPSALRQAIAILRSLCAFLVNQNYLVSNPFSTLAPPSSLQQPLDSRRALSFAQWDHVDA 427
           L  ++L   ++ LRS   +LV+QN L +NP   ++ P +       R        D ++ 
Sbjct: 68  LGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKA------PRHLPKNIDVDDMNR 121

Query: 428 LLQAHADTEARRRLRRGMRWLYATGLRLAEITGAKCEDLEQVEHRTGDGWQLAVSGKGGR 487
           LL    +     R R  +  +Y  GLRL+E+ G    D++ ++  +G+ W   V GKG +
Sbjct: 122 LLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGL---DIKHLDLESGEVW---VMGKGSK 175

Query: 488 IRHVPVPSALVAELE---DELARHGFERQVGAVSNRGIHVLARFDTASRRPAAWSASGLY 544
            R +P+    VA +E   D     G E     +S  G  + AR     +R A W   G+ 
Sbjct: 176 ERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR--NVQKRFAEW---GIK 230

Query: 545 QAIKAFVAQAAASLECAEAADQLKKASTHWLRHSHGAHALQGRQGQVPVPIQVVQNNLGH 604
           Q +   V                     H LRHS   H L+         ++ VQ  LGH
Sbjct: 231 QGLNNHV-------------------HPHKLRHSFATHMLESSG-----DLRGVQELLGH 266

Query: 605 ASVGTTAMYLTTD 617
           A++ TT +Y   D
Sbjct: 267 ANLSTTQIYTHLD 279