Pairwise Alignments

Query, 629 a.a., phage integrase family protein from Variovorax sp. OAS795

Subject, 298 a.a., site-specific tyrosine recombinase XerD (NCBI) from Escherichia coli BW25113

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 80/269 (29%), Positives = 116/269 (43%), Gaps = 39/269 (14%)

Query: 364 MEGPLAPSALRQAIAILRSLCAFLVNQNYLVSNPFSTLAPPSSLQQ-PLDSRRALSFAQW 422
           +EG    ++  + ++ +R L  +L  + +   +P + LA P   Q+ P D    LS AQ 
Sbjct: 63  LEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKD----LSEAQ- 117

Query: 423 DHVDALLQAHA-DTEARRRLRRGMRWLYATGLRLAEITGAKCEDLEQVEHRTGDGWQLAV 481
             V+ LLQA   D     R +  +  LYATGLR++E+ G    D   +  R G    + V
Sbjct: 118 --VERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSD---ISLRQG---VVRV 169

Query: 482 SGKGGRIRHVPVPSALVAELEDELARHGFERQVGAVSNRGIHVLARFDTASRRPAAWSAS 541
            GKG + R VP+    V  LE  L  HG    +  VS   I VL      S+R    +  
Sbjct: 170 IGKGNKERLVPLGEEAVYWLETYL-EHGRPWLLNGVS---IDVL----FPSQRAQQMTRQ 221

Query: 542 GLYQAIKAFVAQAAASLECAEAADQLKKASTHWLRHSHGAHALQGRQGQVPVPIQVVQNN 601
             +  IK +   A    E         K S H LRH+   H L          ++VVQ  
Sbjct: 222 TFWHRIKHYAVLAGIDSE---------KLSPHVLRHAFATHLLNH-----GADLRVVQML 267

Query: 602 LGHASVGTTAMY--LTTDRTPLLGPARSP 628
           LGH+ + TT +Y  + T+R   L     P
Sbjct: 268 LGHSDLSTTQIYTHVATERLRQLHQQHHP 296